Eucalyptus grandis (rose gum): 104450166
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Entry
104450166 CDS
T03547
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104450166
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
egr04040
]
104450166
Ion channels [BR:
egr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104450166
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
crAss_PVA
MtrG
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
104450166
NCBI-ProteinID:
XP_010062911
UniProt:
A0ACC3KLP9
A0A059BVU2
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Position
6:44351218..44361212
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AA seq
730 aa
AA seq
DB search
MNSAPCFRSIFYLNHHPNKTYSLSLSLSLSLAMSTEQETPHASHIHNFPNRDTDEDDDVE
DELEDVEEEEAEEDEDDEQDERSSGRDCNILYGACGGRGRRRPSGWSLGQVLDPRSKWVQ
EWSRVFLLVCATGLFVDPLFFYALSVSDTCMCLFIDGWFAITVTVLRCMTDALHVWNMWL
QLKMANRRFSSHAAAFGSGRGGGRGKLHDTGSGAVALRYLKARKGLLFDLFVILPLPQVV
LWVAIPSQLERGETTRVMTVLLIMFLFQYLPKIYHFVCLLRRMQNLSGYIFGTVWWGIAL
NMIAYFVASHAAGACWYLLGIQRAAKCLREHCRSTNGCFPRVLACKEPIYYGTTGMVRDG
ARLAWGENRQARSMCLDSSENYDYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNL
ESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRL
PQGFRQRVRNYERQHWAAMRGVNECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDL
VLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFS
GDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNERVKRSA
RYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTS
PKPNQDDFDF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagccccctgcttccgttccattttctatttaaatcaccaccctaacaagaca
tactcactctctctctctctctctctctctctcgccatgtcgaccgagcaagaaacgcca
catgcatcacatatccacaacttccctaaccgcgacacagacgaagatgatgatgtagag
gacgaactcgaagacgtagaagaggaggaggcggaggaggatgaagatgatgagcaagac
gagagatcatccgggcgcgactgcaacatcctgtacggcgcgtgcgggggccgcggccgg
aggaggccgagcgggtggtcgctagggcaagttttggacccgaggtccaagtgggtccaa
gaatggagcagggtcttcctgctggtgtgcgcgacgggcctcttcgtcgaccccctcttc
ttctatgcgctctccgtaagcgacacgtgcatgtgcctcttcatcgatgggtggttcgcc
atcaccgtcacggtgctccggtgcatgacggacgcgctccacgtgtggaacatgtggctc
cagctcaagatggccaaccggcgcttctcctcccacgccgccgcttttggctcggggcgc
gggggaggcagaggcaagctccacgacacgggctcgggcgcggtggctctccggtacttg
aaggcccggaagggtttgctcttcgacctcttcgtcatcctccctcttccccaggtggtg
ctgtgggttgcaattccatctcagctggagagaggggaaacaactagagtgatgacagtg
ctgttgataatgttcctcttccaatacctccccaagatctaccacttcgtttgcctcctc
cgccgcatgcaaaacttgtctggctacatctttggcactgtttggtgggggattgctctc
aacatgatcgcctattttgttgcatcccatgcagcgggagcatgctggtacttactaggg
atccaaagagcagcaaaatgcctgagggagcattgtagatcaacgaatgggtgcttccca
agagtgctggcatgcaaagagccaatctactatggaaccaccggcatggtccgagatgga
gccagacttgcctggggtgagaaccggcaggcccggtccatgtgcttggactcctccgag
aactatgactatggtgcttataagtggaccgtccaacttgtcaccaacgacagtcgcttg
gagaagatcttgttccccatcttttggggcttaatgactctgagcactttcgggaacttg
gaaagcacgacagaatggctagaagttgtcttcaacattattgttctgactagtggcctt
ctcttggtcaccatgttgattggaaacatcaaggtgtttttgcatgctacgacgtcgaag
aagcaggcgatgcagctgaagatgaggaacatagagtggtggatgaggaagaggcgcctc
ccgcaagggttccggcagagggtgcgcaactacgagcggcagcactgggctgccatgcgc
ggcgtcaacgagtgcgagatgatccggaacttgccggagggtctccggagggacatcaag
taccacctttgtctggacttggtcagacaggtgccgcttttccaacacatggatgattta
gtccttgagaacatttgcgatcgcgtgaaatcgcttatattcacaaagggagagactata
gcaagagaaggtgacccagtccaacgcatgcttttcgtagtgagaggccacctccaaagc
agccaagtcctccgtgacggcgtcaaaagttgctgcatgctcggcccgggcaacttcagc
ggcgatgagctcctctcgtggtgcctccggcggcctttcattgagcgcttgccaccatct
tcctcgaccctagtcaccctcgagaccacggaggcgtttgggctcgaggccgaggacgtg
aagtacgtgacacagcacttccggtacacgttcgtgaacgagagagtgaagcggagcgcg
cggtactattcacctgggtggaggacatgggctgccgtggcgatccagcttgcgtggaga
aggtacaaacaccgcctgacgctgacgtcgctatcgttcatacggccgaggaggccactg
tcacggtgctcttcgctaggggaggataggctccggctctacacggcgttgctgacatct
ccgaagccgaaccaggatgacttcgacttttga
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