Eucalyptus grandis (rose gum): 104450835
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Entry
104450835 CDS
T03547
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104450835
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104450835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RBD_AKAP-17A
RRM_PARP14_3
P_C10
Motif
Other DBs
NCBI-GeneID:
104450835
NCBI-ProteinID:
XP_010063840
UniProt:
A0ACC3KPJ7
A0A059BYT0
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All DBs
Position
6:complement(54492199..54499440)
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AA seq
445 aa
AA seq
DB search
MAEASKVIHIRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAINAMQV
YSNVQPTIRGRNVYVQFSSHQELTTVDQNTQGRGDEPNRIVLVTIHHMLYPITVEVLHQV
FSPYGFVEKIVTFQKSAGFQALIQYQSRQSAVSAITALQGRNIYDGCCQLDIQYSNLDEL
QVNFNNERSRDFTNPNLPAEQRGRSSQQAGYGDAGGMYPFPASGASTVAFPQVPNAAAIA
AAFAGGLPPGVSGTNDRCTVLVSNLNPDGIDEDKLFNLFSLYGNIVRIKLLRNKPDHALV
QMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGAETHEYSNSNLNRFNRNAAKNY
RYCCSPTKMIHLSTLPQEITEEEIVTLLEEHGAIVSTKVFEMNGKKQALVMFETEEQATE
ALVCKHASSVAGSIIRISFSQLQAI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcttccaaggtgattcacattcgcaacgtgggtcatgagatttccgagaac
gatttgcttcagctctttcagccgtttggagtcattactaagcttgtaatgctccgtgca
aagaatcaggctctcctccaaatgcaggatgtaccatctgctatcaatgctatgcaggtt
tacagcaatgtccagccaacaatcaggggtaggaatgtgtatgtccaattttcatcccat
caagaattgactactgtggatcagaacactcagggtcgaggagatgagccaaatcgaatt
gtcttagtaactatacatcacatgctataccctataacggtggaagtgctgcatcaagtg
ttttctccttatggatttgtagagaagattgtcacctttcagaagtcagctggttttcaa
gcccttatccagtatcaatcacgacagagtgctgtctcagctataacggctcttcaggga
cgtaatatttatgatggttgttgtcagctggatatccagtactctaatcttgatgagctg
caagtgaacttcaacaatgaacggtcaagggattttacaaatccaaatctgcctgcagaa
cagagaggcagatcatcacaacaagctggatatggggatgctggaggtatgtatcctttt
ccagcttctggagccagtacagtcgcatttccacaggtgcccaatgctgcagcaattgca
gctgcctttgcaggaggcttaccccccggagttagtgggacaaatgataggtgtactgtc
ctcgtctccaatcttaatcctgatggaatagacgaggacaagcttttcaaccttttttct
ctttatggaaatattgtcaggattaaacttcttcgaaataagccagatcatgcacttgtt
cagatgggtgatggcttccaggctgaattagcagtacactttctaaagggggccatgctt
tttgggaagcgattggaggttaatttctcaaagcatccgaacattactcctggtgctgaa
acacacgagtatagcaattcgaatcttaaccgcttcaaccgtaatgcggcaaagaactac
cggtattgttgctctcctacgaagatgatccacctctccactcttccccaggagattaca
gaagaggagattgtgacactcctggaggagcacggtgccattgttagtaccaaggttttt
gagatgaacgggaagaagcaagccctagttatgtttgaaaccgaggagcaagccaccgaa
gctcttgtgtgcaagcatgccagctctgtggcggggtccataatccgaatttccttctct
cagttgcaagctatatga
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