KEGG   Eucalyptus grandis (rose gum): 104450961
Entry
104450961         CDS       T03547                                 
Name
(RefSeq) exosome complex component RRP41 homolog isoform X1
  KO
K11600  exosome complex component RRP41
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104450961
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104450961
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104450961
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     104450961
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 104450961
NCBI-ProteinID: XP_010064000
LinkDB
Position
6:56197216..56202503
AA seq 241 aa
MEYVSPEGLRIDGRRPMEMRKLQAEIGVVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ
QLNDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTQLMPRSQIDIY
VQVLQADGGTRSACINAATLALADAGIPMRDFVTSCSAGYLNSTPLLDLNYVEDSAGGPD
VTIGILPKLDKVTLLQMDAKLPLDLFENVMQLAAEGCKAIAEYIREVLSENTKQLEFRRG
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggagtatgttagccccgaaggactccgcattgatggtcggcggcccatggaaatgagg
aaacttcaagcagagattggggttgtcgccaaggctgacggttctgctgttttcgagatg
ggcaacaccaaagtcattgctgctgtttatggtccgagagaggtgcaaaacaggagccaa
caactgaatgatcaggctctggtacgctgtgagtacagcatggctaattttagtactgga
gatcgaatgagaaaacctaagggtgacagacggtcaacagagatatctcttgtcattcga
cagacaatggaagcatgtatattgactcagcttatgcctcgttctcagatagatatatat
gtccaagttcttcaagcagatggaggaactcggtctgcgtgcatcaatgctgccactttg
gcccttgccgatgctgggatcccaatgcgcgattttgttacatcatgcagtgctggatat
ctgaatagcacaccactccttgatttgaattatgtggaagatagtgcaggaggccctgat
gttacaattggaattctaccaaaactcgacaaagttactcttctgcagatggatgctaaa
ttacctctcgatctctttgaaaatgtcatgcaacttgcagcagaaggctgcaaagcaatt
gcagaatacattcgagaagttttgagtgagaataccaaacaactagagttccggcggggt
gtgtag

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