Eucalyptus grandis (rose gum): 104452358
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Entry
104452358 CDS
T03547
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104452358
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
104452358
NCBI-ProteinID:
XP_010065155
UniProt:
A0ACC3LZF1
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Position
1:complement(5738065..5745556)
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AA seq
1034 aa
AA seq
DB search
MIAADESTFRILAYSENARDMLGLTPQSVPSLEKPEVLGIGTDVRTLFTPSSGALLEKAF
GAREIMLLNPLWIHSKNSGKAFYAILHRIDVGIVIDLEPTRTEDPALSIAGAVQSQKLAV
RAISHLQSLPGGDIKLLCDTVVESVRELTGYDRVMVYKFHEDEHGEVVSESKRADLEPYI
GLHYPATDIPQASRFLFKQNRVRMIADCHAMPVHVVQDESLMQPLCLVGSTLRAPHGCHA
QYMANMGSIASLAMAVIINGNDEEAVGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLM
QAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALF
YQGKYYPLGVTPTEAQIKDIVEWLLAFHGDSTGLSTDSLADAGYPGAASLGDAVCGMAVA
YITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENA
EMDAIHSLQLILRDSFRDAERSNSKAVVNAPEVDLELQGVDELSSVAREMVRLIETATAP
IFAVDVDGCINGWNGKMAELTGLSVEEAMGKSLLHDLVFKESKEIVDKLLQHALQGEEDK
NVEIKLKTFGAEHHKKAIFVVVNACSSKDYMNNIVGVCFVGQDITGQKIVMDKFIHIQGD
YKAIVHSPNPLIPPIFACDDNTCCSEWNTAVENLTGWTRGEIMGKMLVGEVFGSCCRLKG
PDALTKFMIVLHNAIGGQDADKFPFSFFDRHGKYVQALLTANKRVSMDGKVIGAFCFLQI
ASPELQQALKVQRQQDKKCFSRMKELAYMCQEIRNPLSGIRFTHSLLEATGLTEDQKQFL
ETSAACEKQMMRIINDADLRSIEDGSLELEKAEFFLGSVMNAVVSQVMILLRERGLQLIR
DIPDEIKTLAVCGDQLRIQQVLADFLLNMVRHAPSPEGWVEIHVRPSLKQTDGGLTLVHN
EFRIVCPGEGLPPELVQDMFHSSRWMTEEGLGLSMCRKILRLMSGEVQYIRESERCYFII
TLELPMPQRSKDID
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgccgacgagtcgacgttccggatcctcgcctacagcgagaacgcgcgggac
atgctggggctcaccccgcagtccgtgccgagcctcgagaagcccgaggtgctcgggatt
gggaccgacgtccgtacgctcttcaccccctccagcggtgctctgctcgagaaggccttc
ggcgcgcgggagattatgctgctgaatcccctctggattcactccaagaattccgggaag
gcgttctacgcgattctgcacaggattgatgtgggcattgtgatcgatttggagcccacc
aggacagaggaccctgccctgtccattgctggggccgtgcagtcgcagaagttggcggtg
agggcgatttcgcacctgcagtcgcttccgggcggggatattaagctgttgtgcgacacc
gtggtcgagagcgtgagggaacttactgggtacgatagggttatggtgtacaagtttcat
gaagatgagcatggggaggttgtgtctgagagcaagagggcggacttggagccatatatt
ggcttgcactatcctgccactgatattccgcaagcatcgaggttcttgtttaagcagaac
cgagttaggatgattgcggactgccatgctatgccggttcatgtcgtacaggacgagagt
ctgatgcaacctctgtgcttggttgggtcgacactccgtgcccctcatggttgtcatgcg
cagtacatggctaacatgggctccattgcatcgttagctatggctgtcattataaatggc
aatgatgaagaagccgttggaggtcgaaactcgatgaggctatggggtctggtggtttgt
catcacacgtcggccaggtgcatcccttttccacttcgatatgcctgtgagttcttgatg
caggcctttggacttcaattaaacatggaattgcagttggcatctcaattgtctgaaaag
catgttttgaggacccaaaccttgttgtgtgacatgcttcttcgggattcccctactgga
attgtcactcagagtcctagtatcatggacctggtgaaatgcgatggtgcggcactcttt
tatcaaggaaagtactacccacttggtgtgacgccgacggaagcccagataaaggatatc
gtggagtggttattagcatttcatggagactcaactggtttgagcacggacagtttggct
gatgccggataccctggggcagcctcacttggggatgcagtatgtgggatggctgttgct
tatatcactaagagggattttctgttctggtttcggtcccatacagcaaaagagataaaa
tggggtggtgctaaacatcatcccgaggataaagatgatgggcagaggatgcacccgcgt
tcttcttttaaggcatttttggaagtggtcaagagccggagtttgccatgggagaatgca
gagatggacgcaattcactctttgcagctcattttgcgtgactcgtttagagatgctgag
cgcagtaactccaaggctgtcgtcaatgctccagaagtggatctcgagttgcaaggcgtg
gatgaattaagctcggttgcaagggagatggttcgtttgatagaaactgcaactgctcct
atatttgctgtggatgttgatggttgcataaatgggtggaatggaaagatggcagaatta
acggggctctcggttgaagaagcgatggggaagtccttgcttcacgatcttgtttttaag
gaatcgaaagagattgttgacaaacttttgcaacatgccctacaaggtgaagaggataaa
aatgtagagataaagttgaaaacgttcggggcggaacaccacaagaaggctatttttgtg
gtggttaatgcttgctctagcaaggattatatgaacaacatagttggagtttgctttgtt
ggtcaagatattactggtcagaaaatagtaatggacaaatttatacacatccaaggtgat
tacaaggctatcgttcatagtcccaatcctttgatccctccaatatttgcttgcgatgat
aatacttgctgctctgaatggaacactgccgtggaaaacctcactggttggacacgtggt
gagattatgggaaagatgcttgttggggaggtctttggcagttgctgtcggctcaaaggt
ccagatgcattgacgaaattcatgatcgttttgcataatgcaattggaggtcaggatgca
gacaagtttcctttctctttctttgaccgacatggtaaatatgtgcaagcgctcttgact
gctaataagagggtcagcatggatgggaaggtaattggagccttctgctttttgcaaatt
gcaagtcctgagctgcaacaagctctgaaagttcagaggcagcaggacaagaaatgtttt
tcaagaatgaaagagttggcttatatgtgtcaagaaataagaaatcctctgagtggcata
cgttttactcactcactcttggaggccacaggcttgactgaggatcaaaagcagtttctg
gagactagtgctgcttgtgagaagcagatgatgaggataataaatgatgctgatctgcga
agcattgaagatggttcattggagcttgagaaggctgaattctttcttggaagtgttatg
aatgctgtggttagccaagtaatgatattgctgagagaacggggtttgcaattgattcgt
gatattccagatgaaatcaaaactctggctgtctgtggtgatcagctgagaattcaacaa
gtattggctgatttcttgttaaatatggtgagacatgctccatctcctgagggttgggtg
gagattcacgtgcgtccaagtctgaagcaaactgatggaggactaactcttgtgcacaac
gaatttaggatcgtgtgtcctggtgaaggtctacctcctgagctggttcaagacatgttc
catagcagtcgttggatgaccgaggaaggtttggggctgagcatgtgcaggaagattttg
aggcttatgagtggtgaagtgcaatatattagagagtcagaaagatgttatttcatcata
actcttgaacttcccatgcctcagagatcaaaggatattgactag
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