Eucalyptus grandis (rose gum): 104452691
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Entry
104452691 CDS
T03547
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
egr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104452691
03460 Fanconi anemia pathway
104452691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104452691
03400 DNA repair and recombination proteins [BR:
egr03400
]
104452691
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104452691
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104452691
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104452691
Bloom's syndrome complex (BTR)
104452691
FA (Fanconi anemia) pathway
104452691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
Alpha_Helical
Herpes_UL6
CCDC-167
Motif
Other DBs
NCBI-GeneID:
104452691
NCBI-ProteinID:
XP_039173257
LinkDB
All DBs
Position
7:complement(10026280..10039092)
Genome browser
AA seq
921 aa
AA seq
DB search
MGSRSMVFSMVNPQRLPSNQIDKAWHALSSLRISSRTYITPGKTLPVKDDNAGHSDKVSR
TVSSSGKEHGHSWESNRKLNGSTARIDASNNYVSNPVVLAHYEAAEGGCPSRQSGNGILG
ENKAHSEGFSAAMNRDSMPNAQTKSSGGVLADELDDDDILESIDVDQIVMEHYQSTSTPQ
PSIQKLPPITPDVERNSLQQDESCLPEELRSNCSHGLKLGLCPDAARHLQEMKDNLIAIS
NELLDNVTELTPEAVEKLRHDRSHLNRQIQQLENHLRSLTVDEERRKSHFSASAAPPTSS
LYETPRAFGSRVEPFRLEAHVHPQNEPGGYDRWNSPSVSFTSDRFPVSSGPVDRDSYIQK
PVEVNYTEGSIDKKWSSWSFPWTKSLEDHNKKVFGNHSFRPNQREIINATMSRYDVFVLM
PTGGGKSLTYQLPALICPGVTLVISPLVSLIQDQIMHLLQANIPATYLSANMDWSEQQEI
LRELNSDYCKFKLLYVTPEKVAKSDVLLRQLESLHARELLARIVIDEAHCVSQWGHDFRP
DYQGLGILKQKFPSTPVLALTATATASVKEDVVRALALVNCIIFRQSFNRPNLRYSVIPK
TKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQEYGHKAAFYHGSMDPAQRAFV
QKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQHSSCVL
YYSYSDYIRVKHMISQGAVEQSPFSNGYNRINMANSGRVLETNADNLLRMVSYCENDVDC
RRLLQLVHFGEKFDSNNCGKTCDNCLKIKSFVEKDVTEIAKQLVELVKLAGQQFSSAHIL
EVYRGSLNQFVKKHRHEKLNLHGAGKHLAKGEASRVLRHLVTEDFLVEDVRKSDLYGSLS
SILKVNESKAYNLCSGGNLSY
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggtctatggtcttctccatggtgaatccccaacgattacccagtaaccaa
atagacaaggcttggcatgctctttccagtcttcggatatcttctagaacatacataaca
cctgggaagactttgccagtcaaggatgacaatgctggccattctgataaagttagcaga
actgtctcaagcagtggcaaagaacatggtcattcttgggaaagcaatagaaagttaaat
ggatcgactgccaggattgatgcgtcaaataattatgtgtcaaatccagttgttttggcc
cattatgaggctgcagaggggggatgtccatctaggcaaagtggaaatggcattttaggg
gagaataaagcacatagtgaaggcttttcagcagcaatgaacagagacagcatgcctaat
gcacaaacgaaatcatcagggggagttttggctgatgagctagatgacgatgacattcta
gagagcattgatgtcgaccagatagtaatggagcactatcaatccacttcaacacctcaa
ccatcaatccagaagcttccacccataactccagatgtggaaaggaatagtttacaacaa
gatgaaagttgtttgcctgaggagctgcgttcaaattgcagtcatgggttaaaactaggc
ctttgccccgatgctgcacgtcatttgcaggaaatgaaggacaatttaattgcaatatcc
aacgagctccttgacaatgtgaccgaactaactccagaagcagtggagaagcttcgtcat
gataggtcacacctcaataggcaaattcagcagcttgagaatcatcttcgctctcttacg
gttgatgaggaaaggagaaagtctcatttttctgcatctgcagcgcccccgacgtcttcc
ctgtatgaaacacctcgagcatttggatctagggtagaaccttttagactagaagcccat
gttcatccacaaaatgagcctggtggttatgacagatggaactcgccatcagtttctttc
acttcagataggtttcctgtttcatcaggtcctgtggatagagactcatacattcaaaag
cctgtggaagttaattatactgaaggttcaattgataaaaagtggagcagctggagcttc
ccgtggacaaaaagcttggaggatcataacaaaaaagtatttgggaaccattctttccgc
ccaaaccaacgagaaattataaatgccacaatgagtagatatgatgtttttgttttaatg
ccaactggaggtggaaaaagcttgacataccagcttccagctctaatatgtccaggggtg
acattagttatctcacccctcgtttcacttattcaagatcaaataatgcatttgttgcag
gctaatattcctgcgacttacttaagtgctaacatggactggagtgaacagcaggagatc
cttagagaactcaattctgattattgcaaattcaagctcctatatgtcacacctgagaag
gttgccaaaagcgatgttttgttgcggcagttggaaagtttacatgctcgtgaacttctt
gctaggattgtcattgacgaagctcattgtgtgagtcaatggggtcatgattttagaccc
gactatcagggtcttggtattctgaaacagaagttccctagcactccagtgttagcttta
actgctactgcaacagccagtgtcaaagaagatgttgtccgagctcttgctcttgtcaac
tgcattattttccggcagagttttaatcgtccaaatttacggtattctgtcattccaaag
acgaaaaagtgtctggaggacatagacaaattcattaaagaaaatcattttgatgaatgc
gggataatttattgtctctcaagaatggactgtgagaaggttgctgaaaagttacaggaa
tatggacataaagcagcattttaccatgggagcatggaccctgctcaacgagcatttgtc
caaaagcagtggagcaaagatgagatcaatataatctgtgccacagtggcatttggaatg
ggtatcaacaagccagatgtccgctttgtaattcatcattcccttcctaaatcaattgaa
ggttatcaccaggaatgtggtcgtgctggacgagatggtcagcattcgtcttgtgtgttg
tactacagttacagtgattatatacgtgtaaaacatatgattagccaaggagcagtagag
caaagtccattctcaaatggttataaccgtatcaatatggcgaattcaggaagggtactc
gaaacaaatgctgacaatctcctgcgcatggtcagttactgtgaaaatgatgttgactgt
cgacgtctcctgcagcttgttcattttggagaaaaatttgattccaataattgcggaaaa
acatgtgacaattgcctcaagatcaaaagttttgttgagaaggatgtgactgagattgca
aagcaattggttgagttggtgaagttagcagggcagcagttttcttcagctcacatatta
gaagtttacaggggttctttgaatcaatttgtcaaaaagcatcgacatgaaaagttgaat
ttgcatggagctgggaaacatctagcaaagggagaagcttcccgtgtgctacggcatctt
gttactgaagatttcctggtggaggatgttaggaaaagtgacctttatgggtctttgtca
tcaatactgaaggtaaatgaatccaaggcttacaatctttgctctggaggcaatctgtca
tactga
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