Eucalyptus grandis (rose gum): 104452737
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Entry
104452737 CDS
T03547
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104452737
03015 mRNA surveillance pathway
104452737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104452737
03041 Spliceosome [BR:
egr03041
]
104452737
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104452737
Spliceosome [BR:
egr03041
]
Complex C
Other components
EJC/TREX
104452737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
104452737
NCBI-ProteinID:
XP_010065507
UniProt:
A0A059B9Y5
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Position
7:complement(10758573..10763612)
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AA seq
420 aa
AA seq
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MGSTAVEKSEEELRKEIDELHRQQREITERLRDPRGLRRGGFPGAGPRNVAANGARQRGF
VRPAERTENEDQPPVKRRLLSAVVKVEDGEIIEDAGAAKDVKMRDPLVEGDASANQVDKK
PSDWQQGSRSRRDFTQRTGKMEFEAPETEPLPRVLPKNEDPSLVNRNKRMLGQLLGTLER
FRKEDMQLSGSDAFMRRSNSLQRAEQRAREESEKLRQQEREQIAEKRKQDLTLRARIAAK
AEEKKLELLYLHWTEHHRKLSNFIRTKTKPSIYYLPAKPFEKDATLIEQQKEQDFLEWKN
TRRQELSEYQKQIGDQYIANVEKQLERWQNARKARKANDDLNLQETMDKELETHRLEHGP
KTRKIPGAGSNEDEDVEDINVGEDDLMDDVLDVDENPRRGDEISKAEAGNASPQPDNTNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggggagcacggcggtggagaagagcgaggaggagctccgcaaggagatcgacgagctc
catcgccagcaacgcgagataacggagaggcttcgagacccgaggggccttcgcagaggg
gggtttcctggtgccggccctcgtaacgtggccgccaatggagctcggcagcgcggtttc
gttcgcccggccgagaggaccgagaacgaagatcagcctcctgtcaagcgccgccttttg
tccgcagtcgtcaaggtggaagacggagagatcatagaggatgctggagcagcaaaggat
gtgaagatgagggatccgttggtggagggagatgccagtgcaaatcaagttgataagaag
ccatctgattggcagcagggcagtaggtcaaggagagatttcactcagcgaacaggaaag
atggaatttgaggctccggaaacggaacctcttccaagggttttaccaaagaatgaggac
cctagcttggtcaatcggaataaaagaatgctgggtcagcttctaggaactttggagaga
ttcagaaaggaggacatgcaactgtcaggatctgatgcatttatgcggaggtcaaattct
ttacaaagagctgagcaaagagcgcgtgaagaaagtgaaaagctgaggcagcaagagcgt
gagcaaattgcagaaaagagaaagcaagatttgactcttagggcacgaattgctgccaag
gcagaagaaaagaagttggagttgctgtatttgcactggactgagcaccatagaaaactt
agcaattttataaggactaaaacaaagccgtccatatactatctacctgcaaaaccattt
gagaaagatgcaaccttgatcgagcagcaaaaggagcaggatttcctggagtggaagaac
actaggcgacaggagctatctgaatatcagaaacagattggcgatcagtatattgcaaat
gtcgagaagcagttggagaggtggcaaaatgcaaggaaagcgagaaaagcaaatgatgat
ctgaacttacaggaaactatggataaagagttggaaacccacaggctggagcatggaccc
aagaccaggaaaatccccggtgcaggtagtaatgaggatgaggacgttgaagacattaac
gttggagaggatgacctgatggacgatgtgctggatgtcgacgagaacccccgcagaggt
gatgaaatatccaaggctgaagcaggtaacgccagtccacaacccgataatactaatcac
taa
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