Eucalyptus grandis (rose gum): 104452843
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Entry
104452843 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104452843
Spliceosome [BR:
egr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104452843
Other components
Complex C specific factors
104452843
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104452843
NCBI-ProteinID:
XP_010065638
UniProt:
A0A059BC19
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Position
7:16285964..16289076
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AA seq
859 aa
AA seq
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MDEDQEMERFGMDNDYDDGQWIDGEFYYRQRREKRAQTKDDALYGVFASGDSDSDYDDSS
KRKRRKNRDLHGKADLSKPVNFVSTGMVMPNREIDENSKTENEDDESADVDEDXAGLGVG
AGVGLGFKKRDDGFDENGEEEDGFLPTAFGRKIKEGAERRREQSKLEKKAQQGGAKRDSY
ESGNVGGFEKYTKGIGMKLLEKMGYKXGGLGKNQQGIVAPVEAKLRPKNMGMGFNDYKET
PAKAPVASLEPEEKKPLPDVPGKEKLWSKQMKRATLKNKAKYITAEELLAKKQEQGVEVV
QKVLDMRGPQVRVLANLENLNAEEKARESDVPMPELQHNVRLIVDLAELDIQKIDRDLRN
EKETALSLQEEKEKLQAEAELQKKQLNNVKEIMNTLGRIEEEKSMGTLTLDLLAKSFGDM
LRRFPDDYKLCNLSCIACSFALPLFIRVFQGWDPLRNPSHGLEVVSRWKSLLQGQECLDI
WDLGSPYTQLVSEVVLPAVRISGINTWEARDPEPMLHFLETWEKLLPSSVLQSILNMVVM
PKLSSAVDSWDPKRETVPIHVWVHPWLPLLGQKLEGHYQIIRSKLSNVLHAWHPSDGSAY
TILSPWKTVFDSASWEDFMRRFIIPKLQLVLQEFQINPADQKLDQFNWVMSWASAIPIHL
MVDLMEKXFFVKWLQVLYHWLCSNPDFNEVMNWYRGWRNLFPQELLANESIRYQLRIGLD
MMDNAAEGMEVAQPGVKENLSYHRVLEQRQFEAQQKAAAYARQQAAVGAGGTSHMDAAGG
MPEMKLKEVIEAYAQQHELLFKPKPGRMHNGLQIYGFGNVSIIVDSINQKVFAQNEEAWS
LVSLEDLLKMHYSSLAKRR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaccaggagatggagaggttcgggatggacaacgattacgacgacgggcag
tggatcgacggggagttctactaccggcagcggagggagaagcgcgcgcagaccaaggac
gacgcgctctacggcgtcttcgcgtcgggggactccgattcggactacgacgactcctcc
aagaggaagcggaggaagaacagggacctccatggtaaggccgatctgtcgaagcccgtg
aatttcgtgtccaccggcatggtcatgccgaacagagagattgatgagaactcgaagacg
gagaatgaggatgacgagtccgctgacgtggatgaggatnaggccgggcttggggttggt
gctggggtgggtttggggtttaagaagcgagacgatggttttgatgagaacggcgaggag
gaggatggtttcttgccgacggcatttgggcggaagatcaaggagggagcggagaggagg
agagagcaatcgaaattggagaagaaagcgcagcaaggtggggctaagagggattcttat
gaatcggggaacgtgggcggcttcgagaagtacaccaagggaattggaatgaagttgctc
gagaaaatgggttacaaanggggtggtcttggcaagaaccagcaggggattgtggcaccc
gttgaagcaaagttgcgtcctaagaatatgggtatgggtttcaacgactacaaagaaact
cctgcaaaggcgcctgttgcctcattggagccagaggaaaagaagccattacctgatgtg
cctggtaaggagaagctttggtctaagcaaatgaagagggcaacactgaaaaacaaagcg
aaatatattacagcagaagagctgttggcgaagaagcaggaacagggtgttgaagttgtg
caaaaggtacttgacatgcgcggacctcaggttagggtattagcaaacttggagaatctg
aatgcggaagagaaggcgagggagagtgatgttcctatgcccgagctccagcacaatgta
aggttgattgtggaccttgctgagttggatattcagaagatcgatagggacctgaggaat
gagaaggagacagctctgagcttgcaagaggaaaaagagaagttgcaagctgaggcagaa
ctccagaagaaacaactaaataacgtgaaggagataatgaatacactaggccggattgag
gaggaaaagtcgatgggaacattgacgttagacttgctagccaagtcttttggtgacatg
ctaagaaggtttcctgatgattataaactttgcaacttatcctgcattgcttgctcattt
gcactccctctgtttatcagagtatttcagggatgggatcctcttcggaatccctcacat
gggttggaagttgtttcacggtggaaatctctattgcaaggacaggaatgtcttgatata
tgggatttgggatccccttatacccagttggtttcagaagttgtcttgcctgctgtgaga
atatcaggcattaacacttgggaggcaagggatccggaaccaatgcttcatttcctcgag
acatgggaaaaattgttgccttcttctgttctgcagtctatactgaacatggttgttatg
ccaaaattgtcgagtgccgtggactcgtgggaccccaaacgagaaactgttcctatccat
gtctgggtgcatccgtggttacccttgttgggacaaaagttggagggtcactatcagatc
atacggtcaaaactgagtaatgtacttcacgcctggcacccgagtgatggctctgcgtac
accatattgtcaccttggaaaactgtgttcgattctgccagttgggaggattttatgcgc
cggtttatcattccaaaattgcagcttgtcctccaggagttccagataaacccagctgat
cagaagctggatcagttcaattgggtcatgtcttgggcctctgctatcccaatccatctc
atggtggacttgatggagaagnntttttttgttaagtggctacaggtgttatatcactgg
ttgtgttctaacccagacttcaatgaagttatgaactggtatcgaggttggcggaatctt
tttccacaagagctgctagcaaatgagagtatcagatatcagcttagaattggtctagac
atgatggacaatgcagctgaaggcatggaggttgcccaacctggtgttaaagaaaactta
agttatcatagggtccttgagcagaggcagtttgaggctcagcagaaagcagcagcttat
gctcgacaacaagctgctgttggtgctggtggtacctctcatatggatgctgccggtgga
atgcctgagatgaagctaaaagaagtcattgaggcctatgcgcagcagcatgagttgcta
ttcaagcctaaacctggtcggatgcacaatggccttcagatatatggttttgggaatgtg
agcatcattgtggactctattaatcagaaggtatttgcccaaaacgaggaagcatggtct
ttggtatctcttgaggatctgctgaagatgcattacagttcactggcaaagagacgttag
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