Eucalyptus grandis (rose gum): 104453007
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Entry
104453007 CDS
T03547
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03022
Basal transcription factors
egr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104453007
09124 Replication and repair
03420 Nucleotide excision repair
104453007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104453007
03400 DNA repair and recombination proteins [BR:
egr03400
]
104453007
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104453007
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104453007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
104453007
NCBI-ProteinID:
XP_010065813
UniProt:
A0A059BBK6
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Position
7:complement(21821865..21828679)
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AA seq
296 aa
AA seq
DB search
MASAPSKLYADDVSLLVVLLDANPFFWSASSLPFSKFISHVISFLNSVLLLNQLNQIVVI
ATGHNCCDYVYDSSSPASRSAGTGKLSALSVDLLEKLEEFVGRDEKLLKKEPEGSIASSL
LSGSLSMALCYIQRVFRSGPRHPHPRILCLHGSQDGPEQYVAIMNAIFSAQRSMVPIDSC
FIGAQNSAFLQQASYITGGVYLKPQLLEGTFQYLSTVFGTDLHSRGFLQLPKSVGVDFRA
SCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQPHSEAASEPNKKRKAGDT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctccttccaagctatacgcagatgacgtcagcctcctcgtggtgttgctg
gacgcgaaccctttcttctggagcgcttcctccctccccttctccaagttcatctctcac
gtgatttcgttcctgaattcggtcctgctgctcaaccagctgaaccagatcgtggtgata
gctaccgggcacaactgctgcgactacgtgtatgattcttcctcgccggcgagccggtcg
gccgggacggggaagttgtcggccctgtccgtggatcttctggagaagttggaggaattc
gtgggtcgggatgagaagttgttgaagaaagagccggaagggtcgatagcgtcttcgctg
ctgtccgggtcgctgtccatggcgctttgctacattcagagggtttttcgttcaggaccg
cgacatccacatcctcgaattttatgcttgcatggatctcaggatgggcctgaacaatat
gttgccatcatgaatgcaatattctctgctcagcgttcgatggtccctattgattcctgt
ttcatcggagctcaaaattctgcctttctccagcaggcttcctatattactggtggtgta
tatctgaagccacaactattggagggaacatttcagtatttatcgacagtttttggcact
gatttgcattctcgtggattcttgcaattgcctaagtccgttggtgtagattttcgcgca
tcgtgcttttgtcacaaaaaaactattgacatgggctacatctgttctgtatgcttgtct
atattctgcaagcaccacaagaaatgttcaacctgtggatctgtttttggtcagccccac
tcagaggctgcctcagaacctaacaagaaaagaaaggcgggagatacataa
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