KEGG   Eucalyptus grandis (rose gum): 104453058
Entry
104453058         CDS       T03547                                 
Name
(RefSeq) pre-mRNA-processing protein 40A
  KO
K12821  pre-mRNA-processing factor 40
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104453058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:egr03041]
    104453058
Spliceosome [BR:egr03041]
 Complex A
  U1 snRNP components
   U1 related factors
    104453058
 Complex B
    104453058
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th SMODS
Other DBs
NCBI-GeneID: 104453058
NCBI-ProteinID: XP_010065860
UniProt: A0A059BBS0
LinkDB
Position
7:22448651..22469944
AA seq 1026 aa
MANDTQFSGFQPLQPPVVGSADPPRNFTQPAPVQPWPALPPQQPQQFVSTVPQHFQTPSH
GTVLMNIGLPSAPLHPQFPPPVQHLAPRPGQPVQNVLPPPPPGPLPISQQNKPMASESLR
PHQPSGLVSNNFMPAGSGLRAPLSSSYTFASHGGQQQGNFVSPRPPSLYHQMSQPQASGV
PSGDQVNLPSESQNTTPVTGLPVTSEQPAVSAALALESSGQHNSSEVVQRIQTDWIEHTS
PAGRKYYYNKKTKQSTWQKPFELMTVTERADASTDWKEFTSSDGRTYYYNKATKQSKWEM
PAELKLAREEAKRKLAPGTQSESLPSSSTSLVPVNEPDGADISSSTSQGPTSSPVPAAPL
NASGDTESAVVAESEEISVPVPTSTLVAVVLDTSMDDAEQTVVQQSNEVAADAIDDGTTP
MIDSKKSTIQDVPWSAGVSVQDKEAKNIEVSAEGAETLVEEKLTNSEPSPYATKLEAKAA
FNALLENANIGSDWTWERAMRIIINDKRYGALKTLGERKEAFNEFVGQRKKQDAEGRRFQ
QKKARDNFKQMLEECRELTSSSRWSKVVTLFEEDERFKAIERDKDRKDIFESFIVELEKK
ERERSLEERKKNMREYRQFLESCDFIKASSQWRKLQDRLEADERCSRLEKMDRLEIFQDY
LHDLEKEEEEQRKIQKEEMRKAERKNRDEFRKLMEEHVAAGTLTAKTLWRDYYMMVKDLP
AYMAVASNTAGSTPKDLFEDVAEELQKQYEEDKSQVDDAVKIRKISLTSTWTVEGLKASI
ADDIRGTPISDINFKLVFDDLLERARKKEERVVKKRKRLGDKFFDLLTTIREITPSSTWD
ECKQLVENSHEYSSIGDDIYCQDIFEEYITKLKDHETRKHKEEKAEREKKKRGKEGKRGK
DRREKDRYDREEEESRDNGADSDREILSETRASYKKKKSGEDRERKRHRHIHRTSDCMDI
AEAEHSEKYHRHNGDHKKATQHESTPESDSESRHRRHKRDRRNGSHRSGGYEEELEDGEF
GEDVKK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggccaatgatactcaattttcaggttttcagcctctacagcctcctgtagttggttct
gcagatcctccaaggaattttactcagccagcgcctgttcaaccttggccagcgcttccg
cctcagcaaccacagcagtttgtttcaacagtacctcaacattttcagactcctagccat
ggtaccgtactcatgaatattggattgccttctgcccctctgcatccccaatttcctcca
ccagttcaacatttggctccaaggcctgggcagccagttcagaatgtccttcctcctcct
cctccagggccattgcctatttctcagcaaaataaacccatggcatctgagtcactacga
cctcatcagcctagtggtcttgtttcgaataacttcatgcctgcagggagcggcctaaga
gctcctctgtcatcatcatacacatttgcttctcatgggggacagcagcaagggaacttt
gtttctccaaggcccccttctctctaccatcaaatgtctcaaccacaggcttcaggagtc
ccaagtggggatcaagtcaatctgccatctgaaagccagaacactacccctgtgactggg
ttgccagttaccagtgagcagcctgcagtttctgctgcactagcacttgagtcaagcggt
cagcataactcttctgaagttgtccaaagaattcaaactgattggatagagcatacatct
cctgcaggaagaaaatattattacaacaagaagacaaaacaatctacatggcagaagccc
tttgagttgatgacggtaactgagcgtgcagatgcttcaactgactggaaggaatttaca
agttctgacggaaggacatactactacaacaaggctactaagcagtctaagtgggaaatg
cctgctgaactgaagttggctcgtgaggaagcaaagagaaaattggccccaggaacacaa
tcagagtctttaccttcctcttctacctcattggttccagttaatgaacctgatggtgca
gatatatcatcttccacatctcaaggacctacatcaagcccagttccagcagctcctctt
aatgcctctggggacacagagtcagcagtggttgctgaatcagaagaaatatctgtccca
gtgcctacttcaacgttggtggctgttgtcttggatacatccatggatgatgctgagcaa
actgttgttcaacagagcaatgaagttgctgctgatgcaattgatgatggcacaacccca
atgattgattccaagaagtccactattcaggatgttccctggtcagctggagtatctgtt
caagacaaagaagccaagaatattgaagtgagtgctgaaggggcagagacacttgttgaa
gagaaattaactaatagtgaaccatcaccttatgccactaagctggaagctaaagctgca
tttaatgcacttctggagaatgcaaatattggttctgactggacttgggagcgggcaatg
agaataataataaatgataaaaggtatggtgctttaaaaacactcggagagaggaaggaa
gcattcaatgagtttgttggtcaaaggaaaaagcaggatgctgagggtagacgctttcaa
cagaaaaaagctagggataattttaagcaaatgttagaagaatgcagagagctgacatct
tcttcaagatggagcaaagtagtgacattgtttgaagaagatgaacgtttcaaagctatt
gaaagagacaaagaccggaaggatatatttgagagcttcatagttgagctggaaaagaag
gagagggagagatctttggaggagcggaagaaaaatatgagggaatacaggcagttcttg
gagtcttgcgattttattaaggcaagcagtcagtggcgcaaactacaagatcgcttggag
gctgatgagagatgttcacgcctggaaaagatggatcggttagagatattccaggattat
ctgcatgatctagagaaagaagaggaggagcagaggaagatacagaaggaggaaatgaga
aaggcagaacgcaaaaaccgtgatgaattccgcaaattgatggaagaacatgttgctgct
ggcactcttactgctaagactctttggcgtgattactacatgatggttaaagatttgcca
gcatatatggcagttgcgtcaaatacggcaggttcaacgccaaaagatttgtttgaagat
gttgccgaggaactacagaaacagtatgaggaggataaatctcaagtagatgatgcagta
aaaattagaaagatctccttaacatcaacctggactgttgaaggcctgaaagcatccatt
gcagatgatattcgtggcacacccatatcagatattaattttaaattagtgttcgatgac
ttgctggaaagagcccggaagaaagaagagagagttgttaaaaagcgtaaacgactgggt
gataagttcttcgatttacttaccactataagggaaataactccatcttcaacatgggat
gagtgcaaacaattggttgaaaatagtcatgagtacagttcaattggtgatgatatatat
tgtcaggacatttttgaagagtacataacaaaattgaaggatcacgaaacaagaaaacac
aaggaggaaaaggcagaaagggaaaagaagaagcggggaaaagaagggaaaagagggaaa
gataggagagaaaaagataggtatgatagagaggaggaggaatcgagggacaatggagca
gacagtgaccgagaaattttgtctgagactcgtgcatcttataagaagaaaaaatcaggt
gaagatcgtgaaagaaagcgacacaggcatattcatagaacatcagattgtatggacatt
gctgaggcagagcattctgaaaaatatcacagacacaatggtgaccataagaaggccaca
cagcatgaatccactccagagtctgacagtgaaagccgccataggagacacaagagagat
cgcagaaatggttctcacagaagtggtgggtatgaggaggaacttgaagatggggaattt
ggcgaagatgtaaaaaagtag

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