Eucalyptus grandis (rose gum): 104453084
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Entry
104453084 CDS
T03547
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104453084
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
104453084
TFIIIC, fungi type
104453084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_CcmH_CycH
TPR_8
TPR_7
TPR_1
TPR_16
ANAPC3
TPR_9
TPR_17
TPR_6
TPR_12
NatA_aux_su
TPR_11
ARM_TT21
TPR_IF140-IFT172
ARM_TT21_5th
PUL
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
104453084
NCBI-ProteinID:
XP_010065896
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Position
7:complement(23208770..23226471)
Genome browser
AA seq
868 aa
AA seq
DB search
MDPLDFTKDDDSGLQPYQQFERLEYEALAEKKRKGLDSSQIVLERCAKKARVEDNPGATF
EEIMEAMNYGSRRKSKKTKKRGRRKGSRNKLSSEITRMLGDATLHYARGNYDEGISISSQ
VVRLAPNLPDPYDTLGRIYDDLGNDKKAVDFYMIAAHLKPKDSSMWKRLFTRSLEQGNNG
QARYCLSKAITADPKDVSLLFHQASLHSNLGDYLKAAELFEQIQKICPEDVEALQTGAKL
YLRCGQLEHAISILVEYVNSYPSEADLSVVDLLATIYMENNAYDKAIQLFHSHSQKKPLP
ANLVVKEGICHLHLGNSEKAETLFSFLQKASLCDCADLITEIADTYMSLEHFDCALKFYQ
MLEGNLENSGSYHLKIAQCYQALKMRANAISAFYRGLHLLEDNVGARLTLASLLLEDDRV
DETISLLSPPENSGSGDVDSDNHRPWWDDGKVRLKLCSIYRAKGMIKDFVDAILPLVHES
LYIETLRQKVKTKKRIPRRVLFERAKILDDQQNDNVFSGFRPLASSSELSKAVRARRLLQ
KRATLKEEKKAAAVASGVDWCSDHSDDDQLEDRPQETMREPPLQNIWKDEQHHLLIVDLS
KALASLKRYWDALEIIDLFLRLAHNVLPSDKEEELRSLGAQISYNTTDPKQGFDWVRQVV
QQHPHSLVAWNCFYKMLSSMEKDYKKYSKFLRNLRVKHADCVPPILIAGHQFTISSHHQD
AAREYLKAYKLLPDSPLINLCVGTSLINLALGFRLQNKHQCITQGLAFLFKNLQQSENSQ
EALYNIARAFHHVGLVTLAASYYEKVLATREKDCPLPQLPYENRFHVENVKPGSCDLRRE
AAYNLHLIYKKSGASDLARQVLKDYCSF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacccactagatttcacgaaagacgatgattctggactccaaccttaccagcaattt
gagcgccttgagtatgaagcattggccgagaagaaacggaaaggcctggatagctctcaa
attgttttggaaagatgtgcgaagaaggctcgggtggaggacaatcccggagcgaccttt
gaggagattatggaagcaatgaactatggttcgcgtagaaaatcaaaaaagactaagaag
aggggtaggagaaaagggtcaagaaataagcttagttcggaaatcacacgaatgctcggt
gatgcaactcttcactatgcccgtggtaattatgatgagggcatatcaatatcgagtcaa
gtggtcaggctagcaccaaatttgcctgatccatatgatacattaggaaggatttatgat
gatcttggcaatgacaaaaaagcagtggacttttacatgattgctgcacatcttaagcca
aaagattcttcaatgtggaagcgtctcttcacccggtccttagaacaaggtaacaatggt
caggcaaggtattgcctctctaaagccatcacagcagacccaaaagatgtttctctactg
tttcaccaagcatcactgcattcaaaccttggagattatctaaaggctgcggagttgttt
gaacagatacaaaagatatgtcctgaggatgttgaagctctccagactggggcaaagttg
taccttagatgtggccagcttgagcatgctatcagcattttggttgaatatgtaaacagt
tatccatctgaagctgatttgagcgtggttgatctgctagccacgatatacatggaaaat
aatgcatatgataaagctattcagctttttcattctcacagccagaaaaagccactccct
gcaaatttggttgtgaaagaaggaatttgtcatcttcatctcggaaattcagagaaggca
gagactctcttcagctttttgcagaaggcgagcttatgtgactgtgcagacctgattact
gaaatagcagatacctatatgagtcttgagcattttgactgcgcattaaagttttatcag
atgctggagggaaatttagagaatagcggatcttaccatctgaagattgctcagtgttat
caagcattgaaaatgagggcaaatgcaatttctgctttctatagaggtttgcatctactt
gaggacaatgttggtgcccgcctaacattagcttcactgctccttgaagatgatagagta
gatgagaccatttcactgctatctcctcctgaaaattcaggctcaggggatgtggattct
gataatcatagaccatggtgggatgatggaaaagtgaggctaaagctttgcagcatatat
agagcaaaaggaatgattaaggactttgttgatgcaatcttacctctggttcacgagtca
ctttatatcgaaactcttcggcagaaggttaaaacaaaaaaaagaatcccgagaagagtt
ctctttgaaagagccaaaattctggatgatcagcagaatgataacgtattttccggcttc
cggccacttgcttccagctcagaactgtcaaaggctgttagagccagaagattgcttcaa
aagagggcaacactgaaggaagaaaaaaaagctgccgctgttgcatcaggagtcgattgg
tgcagtgatcattcagatgatgatcaactggaagatcgcccacaagaaaccatgagagaa
ccccccttgcagaatatttggaaagatgagcagcatcatcttcttatagtcgatctgtct
aaggccttggcatccttgaaaaggtattgggacgccctagagattattgatctctttttg
agattggcacacaatgtacttccttcagataaggaggaggagcttcggtcacttggagca
caaatatcatacaacaccacagacccaaaacagggattcgattgggtaaggcaagttgtg
cagcagcatccccacagtctggttgcctggaattgcttttacaagatgctttcaagcatg
gagaaagactataaaaaatattcgaagtttttgcgtaatttgcgtgtcaaacatgcggat
tgtgtgccacctattcttattgctgggcatcagtttacgattagtagccaccaccaagat
gctgcaagggaatacctaaaggcctataagctgctccctgacagtcccttaatcaacctc
tgtgttggaacttccctgattaacttggcgcttggtttcagacttcaaaacaagcatcaa
tgtattacgcaagggttggcatttctattcaagaacttgcagcagagtgaaaatagccag
gaagcattgtacaacattgcgcgggcatttcatcatgtcgggctagtaacgctcgcggcc
tcgtattacgagaaggtgctggccacacgagaaaaggactgtcctctcccacaacttcca
tacgagaatcggttccatgtggaaaatgtgaagcctggttcttgcgatctccggagagaa
gctgcttacaacttgcatctgatctacaagaagagcggggcctccgatcttgcaagacag
gtcttgaaagactattgctcattttga
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