Eucalyptus grandis (rose gum): 104453100
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Entry
104453100 CDS
T03547
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00100
Steroid biosynthesis
egr00909
Sesquiterpenoid and triterpenoid biosynthesis
egr01100
Metabolic pathways
egr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104453100
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
104453100
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
egr01006
]
104453100
Enzymes [BR:
egr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104453100
Prenyltransferases [BR:
egr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104453100
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
zf-C2H2_aberr
PreP_C
Motif
Other DBs
NCBI-GeneID:
104453100
NCBI-ProteinID:
XP_010065915
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Position
7:23775373..23804053
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AA seq
413 aa
AA seq
DB search
MGSLGVILKHPDELYHLLKLKMEARNAEKQIPQQPHWRFGYSMLRKFSKTFAFVIEQLPT
ELRDAVCILYLVLRALDTVEDDTSIPIEVKVPILKAFLEHVFDKEWHLSCGTKKCKVLMD
QFHHVSTAFLELGKRYQEVIEDITKRMGVGMAKFICKEVETVDDYDEYCHYVSGLIGLGL
SKLFHASGAEDLAPDSLSNSMALILQKQDIIRDYLEDINEIPMSRMFWPRQIWGKYVNKL
EDLKYEENSVKAVQCLNEMVTNALTHVEDSLTYMSALRDPAIFRFWAIFQIMAIGNLSLS
YNNIEVFRGEVKIRPGLAAKVRDRTRTMADVYGAFYDFSCMIKSKVDKDDSNATKTLSII
EGIQKACRDSGLLNKRKSYILATEPTYSSVLVAFLLMILVIVVAHLSASQLSN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagtgattttgaagcatccggatgaactctaccatctgctgaagctg
aagatggaggcgaggaatgccgagaagcagatccctcagcaacctcattggcgattcggc
tactccatgctccgcaagttctccaagacattcgctttcgtcatcgaacaactccccact
gagcttcgcgatgcggtgtgcatcctctatttggtcctgcgagcccttgatacagttgag
gatgacacaagcatacctattgaagtcaaagtgcctatcctgaaagcttttcttgagcac
gtgtttgataaggagtggcatctttcatgtggtacaaagaagtgcaaggttttaatggac
caatttcatcatgtttcaacggctttcctggagcttgggaaaaggtatcaagaggtaatt
gaggatattactaaaagaatgggagtaggaatggcaaaatttatttgcaaagaggtggaa
acagttgacgattacgatgaatattgccactatgtgtcaggacttataggtttaggtctg
tcaaagcttttccatgcttctggagctgaagatttggcaccagattctctatccaattca
atggctttgattctacagaaacaagacattattcgagattatttggaagatatcaatgaa
attccaatgtcacgcatgttttggcctcgtcagatttggggtaaatatgtaaacaaactt
gaggacttgaagtatgaggaaaactcagtgaaggcagtacaatgtttgaatgagatggtc
acaaatgctttgacacatgttgaagacagtttgacatatatgtccgctttaagggatcct
gctatattccggttttgggctatttttcagataatggcaattggaaatttatctttatcc
tacaacaatattgaagttttcagaggcgaagtaaagatcaggccaggtcttgctgctaaa
gttagggatcgcacaaggacaatggctgatgtttatggtgctttctatgatttttcttgt
atgataaagtccaaggttgacaaggatgattctaatgctacaaaaacattgagcataatc
gagggtatacagaaggcttgcagagattctggcctcctaaacaaaaggaaatcttacatc
cttgcaactgaacccacatatagttctgttctggttgcctttctgctcatgatattggta
atagttgtcgctcatctctccgcaagccaattgagtaactaa
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