Eucalyptus grandis (rose gum): 104453152
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Entry
104453152 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03020
RNA polymerase
egr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104453152
09124 Replication and repair
03420 Nucleotide excision repair
104453152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104453152
03400 DNA repair and recombination proteins [BR:
egr03400
]
104453152
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104453152
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104453152
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
DDR
Motif
Other DBs
NCBI-GeneID:
104453152
NCBI-ProteinID:
XP_010065975
UniProt:
A0A059BBW8
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Position
7:26284318..26291094
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AA seq
321 aa
AA seq
DB search
MEGGGGASYQRFPVVKVRETKDDYLKFELRGTDASVANALRRVMIAEVPTIAIDLVEIEV
NSSVLNDEFIAHRLGLVPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQT
LDVTSKDLISSDHTVVPVDFSDALADDSAEQKGITIVKLRRGQELRLRAIARKGIGKDHA
KWXPAATVTFMYEPEIHINEDLVETLSLEEKQSWVESSPTKVFDIDPNTEQVLVVDPEAY
TYDEEVIKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRL
SEDTVEADDQFGELGAHMRGG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggcggcggcgcgtcgtaccagcggttcccggtggtgaaggtccgggagacg
aaggacgactacctcaagttcgagctccgggggacggacgccagcgtggccaacgccctc
cgccgcgtcatgatcgcggaggtccccaccatcgccatcgacctcgtcgagatcgaggtc
aactcctccgtcctcaacgacgagttcatcgcccaccgcctcggcctcgtccccctcacc
tccgaccgcgccatgtccatgcgcttctcccgcgactgcgacgcctgcgacggcgacggc
cagtgcgagttctgctccgtcgagttccacctccgcgccaagtgcatgaccgaccagacc
ctcgacgtcaccagcaaggacctcatcagctccgaccacaccgtcgtccccgtcgacttc
tccgacgccctcgccgacgattccgccgagcagaagggaattactattgtgaagcttcgc
cgagggcaagagctaaggctgcgagcaatagcaagaaaaggaattggcaaagatcatgca
aagtggntccccgcagccacagtgacattcatgtatgaacctgaaattcacatcaatgaa
gatttagtggaaaccttgtcccttgaggaaaaacaaagttgggtggaaagcagtcccacc
aaagtgtttgacatcgatccaaatactgagcaggtgctagtggttgatcctgaggcttac
acttatgatgaagaagtaataaaaaaagctgaagccatggggaagccaggtcttgtggag
atatatgcaaaggaggacagttttatattcactgtcgaatccactggagcaattaaagct
tcacagttggtactcaatgccatagacgtgttgaagcaaaaactggatgcagttcgctta
tcagaagatacagtggaagctgatgatcaatttggggagctaggcgctcatatgcgcgga
ggatga
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