Eucalyptus grandis (rose gum): 104453233
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Entry
104453233 CDS
T03547
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
104453233
Spliceosome [BR:
egr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104453233
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
PPR_1
AEP1
TetR_C_7
Motif
Other DBs
NCBI-GeneID:
104453233
NCBI-ProteinID:
XP_039172201
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Position
7:complement(29009727..29012628)
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AA seq
690 aa
AA seq
DB search
MRQLGSPPPAVEVRELEEVPEQWRRAKLAWLCKELPAQKGGTLVRILNAQRKWMRQEDAT
YVTVHCMRIRENETAFKVYKWMMQQHWYKFDFALATKLADYLGKNRKFAKCREIFDDIIN
QGRVPSESTFHVLIVAYLSAPIQGCLEEACSIYNRMIQLGGYQPQLSLHNSLFRALVSGS
GALSKHHLKQAEFIFHNLVTSRLEIHKDIYGGLIWLHSYQDTIDGERIAELRKEMQESGI
EESREVLLSVLRACSKEGNLDDAERVWLKLQHLGDKLPSLAYVYKMEVYAKVAEHTKSLK
LFREMQEHLGSATVAAYHKIIDVICKAQDVELAESLMKEFKNSGLKPLSPSFIDMMNMYF
NLGLHDKLASAFSQCVEKCQPNRVIYGIYLDSLVRIGDISKAEEIFSEMHSSGAIGISGR
NCNSILGGYLSTGDYVKAEKVYHLMCQKRYEIEPASMEKLDPILSLRGKAVKKPVSLKLT
KEQREILVGMLLGGLQIDSDEQRKNHMIKFKFNENSGMHSDLKRHIYEHYHEWLHPSCKL
DDNSNEIPNSFSTIRHSYFGFYADQFWPRGKPVIPKLIHRWLSPCALAYWYMYGGYRMSS
GDILLKLRGSQEGVERVVKALKAKSLDCRVKRKGQVYWIGLLGSNSTWFWKLIEPYVLDL
NFAQEDDGEILSFNSGSDSDKNSDNSEEDR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactggggtcgccgccccccgcggtggaggttagggagctggaggaggtaccg
gagcagtggcggcgggcgaagctggcgtggctgtgcaaggagttgccggcgcagaagggc
gggactctggtgaggattctgaacgcgcagaggaagtggatgaggcaggaggatgccacc
tatgtgactgttcactgtatgaggatccgggagaacgagaccgccttcaaggtgtacaag
tggatgatgcagcaacattggtataaatttgatttcgcgcttgcgacgaagcttgctgat
tacttgggtaagaaccggaaattcgccaagtgtagggagatattcgatgacataataaac
cagggacgggttccaagtgaatctactttccacgttctcatagttgcatatctgagtgca
cccatccaaggttgcctcgaggaagcatgtagcatttacaatcgcatgatccagttagga
gggtatcagcctcaacttagtttgcacaactctctattcagagctctggtgagcggctcg
ggagccttgtcgaagcatcatctcaagcaagcagagtttatattccataatttggtgaca
tctaggctcgaaatacacaaggatatttacgggggtctcatatggctgcatagctatcag
gacactatagatggagagcggatcgctgaacttagaaaggagatgcaagaatctggaatt
gaagagtctcgagaggtgcttttgtctgtactgagggcttgctctaaggaggggaatttg
gatgacgctgaaagggtttggctcaaacttcagcatttgggtgataagcttccttctctg
gcttatgtttacaaaatggaagtctatgcgaaggttgcagagcacacgaagtcattgaaa
ttattcagggagatgcaggagcatttgggttcggctaccgtggcagcgtaccataaaatt
atagatgtgatttgtaaagctcaagatgtggaattggcagaatctctcatgaaagagttc
aagaatagtggtctaaagcccctcagtccttcttttattgacatgatgaatatgtatttc
aacttaggcctgcacgataaactagcgtcagctttctcccagtgtgtagagaagtgtcag
ccaaatcgtgtaatatatggcatttacttggattctttggtgaggattggtgacattagc
aaagccgaggagatttttagtgaaatgcatagtagcggagctattggcatcagtggacgt
aattgcaactccattttaggtggttatttgtccactggggactatgtgaaggcagaaaaa
gtataccatctaatgtgtcagaaaaggtatgaaattgaaccggcctcaatggaaaagctt
gaccctatccttagtttgagaggaaaagcggttaagaagccagtgagcctcaagctgacc
aaagagcaaagggaaattttagtgggtatgctcttaggtggtttacaaatagattctgat
gaacagagaaaaaaccacatgatcaagttcaagttcaatgagaattctgggatgcattct
gatctgaagagacatatctacgagcattaccatgagtggctacatccttcttgcaagtta
gatgataattccaatgaaataccaaatagcttctccacgattcgtcattcatatttcggt
ttctatgcagatcagttttggcccagagggaaaccggtgattccaaagttaatacatcgg
tggttgtcaccatgtgcccttgcgtactggtacatgtatgggggctacaggatgtcatca
ggagatatattgcttaaacttagaggaagtcaagaaggagttgagagagttgttaaggcg
ttaaaagcaaagtccttggattgcagggtaaagaggaaaggacaggtgtattggataggt
ctactaggaagcaattctacgtggttttggaaattgatcgaaccttatgtactggacttg
aattttgctcaagaggatgatggagaaatcctcagcttcaacagtggttctgactctgat
aagaattctgataacagtgaagaggataggtag
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