Eucalyptus grandis (rose gum): 104453356
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Entry
104453356 CDS
T03547
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104453356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104453356
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104453356
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Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
SWI2_SNF2
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
104453356
NCBI-ProteinID:
XP_010066188
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Position
7:35338502..35346951
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AA seq
885 aa
AA seq
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MQVGLGFEAFFAGSGSGSGSVSARGKYSGGHKKMKFSNDANDQIDYSDPFAIYRMLDEVD
SGKYGSVTRDLEAVTLQRMQHLTPLINASLNTETFPRKEVSKLAGEPAGNSGQENIITLD
DDGARNDAPTAAQPVLILDDSDEEDNTNWKPSYPFQQIFLATQAGVAGQSPVGDIAVKNY
RNVAQGDGLLNAETETKKDKGVYVGVDNEPTKVVDDGLGDIWNEMTMALECSKDVAEDME
NWEHPSSDDNSSEDMEDCDHSFVLKDDIGFVCRVCGVVDRKIETIFEFQYNKVKRSSRTY
VSDNRKGGDASGLAGLDLPQDDLAVTEIAAHPRHMKQMKPHQVEGFNFLVSNLITDNPGG
CILAHAPGSGKTFMMISFMQSFLAKYPHARPLVVLPKGILPTWKKEFQTWQVEDIPLLDL
YNKADSRAQQLEVLRQWVNQKSILFLGYKQFSAIVCDTVTSAPSVKCQEILLQAPSLLIL
DEGHTPRNENTDVLQSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLDSSRVV
IKRILSRANMSGIRKQINGGKETFFYDLVEHTLQKETDFKRKATVIQDLREMTKKVLHYY
KGDFLDELPGLVDFTVVLNLSPKQRPEVENVRRLSRKFKMNSVGSAVYLHPKLKHLSHSS
AATNGNSKLVDPQTMMKIDELLEKLDVKQGVKAKFFLNILRLCESTGEKLLVFSQFLLPL
KFMERLVMKVRSWSLGREIFFISGESSTEERESSMEQFNNSPDAKVFFGSIKACGEGISL
VGASRIIILDVHLNPSVTRQAIGRAFRPGQKRKVYAYRLVAADSPEEEDHVTCFKKELIS
KMWFEWNEYCGFQDFDVETVDAKECGDPFLETPFLHEDIKVLYKR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcggtctaggattcgaggccttcttcgccggctccggctccggctccggctcc
gtctcggcacgcgggaagtactccggagggcacaagaaaatgaaattttctaatgatgca
aatgatcagattgactactctgatccatttgcgatctaccgtatgctggacgaggtggac
tctggtaaatacggcagtgtgacaagagacttggaagcggtgactctccagaggatgcag
cacttgacacctctcattaatgcttcgctaaatactgagacctttccaagaaaggaggtg
tcgaagcttgctggggaaccagcagggaattctgggcaagagaatatcattactttggat
gatgatggtgcaaggaatgatgctccaactgcagcacagcctgtccttattcttgatgac
tcagatgaggaagacaatacgaactggaaaccctcatatccttttcagcaaattttcttg
gcaacacaagcaggagttgctggacaatctcctgtgggagatatagcggtaaaaaactac
agaaacgttgctcaaggagatgggcttctgaatgctgaaactgaaactaagaaagacaaa
ggtgtatatgtcggggtagacaatgaaccaacaaaggttgttgatgatggtcttggggat
atctggaatgagatgacaatggcattggaatgttcaaaggatgttgctgaggatatggag
aactgggagcatccttcatctgatgacaattcaagtgaagatatggaggactgtgaccat
tcatttgttctcaaggatgatattggttttgtttgtcgagtttgcggggttgttgatagg
aaaatcgagaccatatttgagttccagtataataaagtaaagaggagcagcagaacatac
gtgtctgataaccggaaaggcggcgatgcttcagggttggctggtcttgacctgccacag
gatgatttggcagtgacagagattgctgctcatccaaggcacatgaagcagatgaaacct
catcaagtggagggcttcaactttcttgtgagcaacttaattactgataatcctggtggc
tgtattttggcccatgctccaggatccgggaagacatttatgatgatcagcttcatgcag
agcttccttgcaaagtatcctcatgccaggcctcttgtggtgcttccgaaaggaatttta
cctacatggaaaaaggaatttcagacatggcaggtggaggacatcccattgctcgacctc
tataataaagcagatagccgggcccagcaactggaggttttgaggcagtgggtcaatcag
aaaagcatacttttcttggggtacaagcagttctctgcaattgtttgcgacactgttacc
agtgctccttctgttaaatgtcaggaaatactgctgcaagccccgtcacttcttattttg
gatgaagggcacacaccccggaacgagaacactgatgttctgcaatctcttgccaaagtg
cagacaccaaggaaagttgtcctttcaggaactctctatcaaaatcatgtgaaagaggta
ttcaatatattgaatcttgtccgtcccaagttcctgaaactggactcatcacgagttgtt
attaagcgcatcttgagtagggcaaacatgtctgggattaggaagcagataaatggtgga
aaagaaactttcttttacgatttggtggagcatactttgcagaaggaaactgacttcaag
aggaaagctactgtcatccaagatttacgcgagatgacaaaaaaggtcctccattattat
aaaggtgatttcttggacgagctccctggacttgttgacttcactgtagtgctgaatctt
agtcccaaacagaggccagaagtggagaatgtgaggaggctttcacggaagttcaagatg
aattctgttggaagtgctgtttatctgcatccaaaattaaaacatttgtctcatagttcc
gctgcaactaatggtaatagtaagttagtggatcctcagactatgatgaagatagatgag
ttgctggagaagttagatgtgaagcagggagttaaggcaaaattctttctaaatatcctg
agattgtgcgagtctacaggggagaagttactggtcttcagtcaattcctattgccgctg
aaattcatggagagattggtgatgaaagtgagaagttggtctcttgggagagaaatcttt
ttcatatcaggtgagtcaagtaccgaggagcgggagtcatccatggagcaattcaacaat
tcacctgatgccaaagttttctttggctcaatcaaggcatgtggtgaaggaatttctctt
gtgggtgcatcacggattattattctggatgtccacctcaatccttcagttactcggcaa
gcaataggtcgtgcatttcgacccgggcagaagagaaaggtctatgcatatcgacttgtt
gctgctgattcccccgaagaggaagatcacgttacatgcttcaagaaggaattgatttcg
aagatgtggttcgagtggaacgagtattgtggttttcaggacttcgatgtggagactgtc
gatgcaaaggaatgtggtgatccttttctggagaccccattcctccatgaggatatcaaa
gtcttgtacaaaaggtaa
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