Eucalyptus grandis (rose gum): 104453363
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Entry
104453363 CDS
T03547
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104453363
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104453363
Membrane trafficking [BR:
egr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
104453363
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104453363
Exosomal proteins of bladder cancer cells
104453363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
104453363
NCBI-ProteinID:
XP_010066199
LinkDB
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Position
7:complement(35415390..35421598)
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTCRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISALKNKTASPGDDLLR
LGQMNTDLFGGVDVVVKYVLEGHDRGVNWASFHPNLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDIIFYTKERFLRCYEFSSQRDTQVIPIRRPG
STSLNQSPKTLSYSPTENAVLICSDVDGGSYELYVIPKDSAGRGDSGQEAKRGTGGSAVF
VARNRFAVLDKSSNQVLVKNLKNEIVKKSGLPFPADAIFYAGTGNLLCRAEDRVYIFDLQ
QRLVIGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNSIFCLDRDGKNRAIVIDATEYV
FKLSLLRKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASAKEIDERDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNMDKLTK
MLKIAEVKNDVMGQFHNALYLGDVRERIKILENAGHLPLAYITATTHGLQDVAERLAAEL
GDSVPSLPEGKQPSLLMPPMPVMCGGDWPLLRVMKGIFEGGLDNVGRGTADEEEEEVEGD
WGDELDMVDVNGLANGDVTAIMEDGEVGEENEEEGGWDLEDLELPPEAETPRASVNAHSA
VFVAPTPGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLNRQLGIRNFIPLRSMFLDLHTG
SHTYLRAFSSAPVVSLAVERGWNESASPNVRGPPALVYNFSQMEEKLRAGYRATTAGKFT
EALRLFLSILHTIPLIVVESRREVDEVKELIVIVKEYVLGLQMELKRREIRDDPVRQQEL
AAYFTHCNLQMPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPTVENQAKMARQVLQ
AAERNMIDASELNYDFRNPFVVCGATYVPIYRGQKDVSCPYCSSRFVPSQEGQLCTVCDL
AVVGADASGLLCSPSQVR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagttcgagacgaagagcaaccgagtgaaggggctcagcttccacagcaag
cggccgtggatcctcgcgtcgctccacagcggcgtgatccagctatgggactaccgcatg
ggcacgctgatcgatcggttcgacgagcacgacggccccgtccgcggggtgcattttcac
aagtcgcagccgctcttcgtgtccggaggagacgattacaagattaaagtttggaactac
aagacatgcaggtgtctctttacccttctaggacaccttgattatatccgtactgtgcag
ttccatcatgagcatccatggatagtcagtgccagtgatgatcaaactatccgcatatgg
aactggcagtctcgtacttgcatatctgtcttgacaggtcacaatcattatgtcatgtgt
gcttcattccacccaaaagaggaccttgtcgtctcagcttcccttgatcagactgttcgc
gtatgggatatcagtgccttaaaaaacaagacagcgtcacctggtgatgacttactccgg
ctgggtcagatgaatacagacttatttggtggtgtggatgttgttgtcaagtatgtcttg
gaaggccatgaccgaggagtcaactgggcttcatttcatcccaaccttcccttgatagtc
tctggagcggatgatcgccaagtaaagttatggcgcatgaatgataccaaggcttgggaa
gtggacacccttagagggcacatgaacaacgtgtcttgtgttatgttccatgcaaaacaa
gacataattgtatctaactcggaagacaaaagtatccgcatttgggatgcaacaaagcga
actggaattcaaacatttcgacgtgagcatgaccgtttctggatactgtctgctcatcct
gaaatgaatcttttggcagccggtcatgacagtggcatgatagtgtttaagttggagaga
gagcgacccgcctttgctgtgagtggtgatattattttttacaccaaagaacgtttcttg
cgctgttatgagttttctagtcaacgggacacacaggttattcctattcgacgccctgga
tctaccagcctcaaccaaagtccaaagacactctcttatagtcctacagaaaatgctgtt
cttatttgctctgatgtggatggaggatcttatgaactgtatgtcatcccaaaagacagt
gctggtaggggtgatagtggtcaagaggcaaagagaggtactggaggatctgctgttttc
gtggcccgaaatagatttgcagtgcttgacaaaagtagcaatcaagtattggtcaagaat
ctgaagaacgagattgttaagaagagcgggcttccatttcctgcggatgcaatcttttat
gcaggaactggcaacttactgtgtagggcagaagacagagtttacatttttgatctccag
cagaggttggttattggtgatctgcagaccccttttatcaagtacgtagtgtggtcaaat
gacatggaaagtgttgccttgctcagcaaacacgcaattgttattgctagcaagaagctt
gtccaccaatgcactctccatgagaccattcgtgtgaagagcggagcctgggatgacaat
ggagtattcatctacactacactgaaccacattaagtattgcctccctaatggcgatagt
ggaataattagaacgcttgatgtccctatctacatcacaaaggtttcagggaattccata
ttttgtttggatcgtgacggaaagaatagagctatagttatcgatgcaacagagtatgtg
ttcaagttgtcccttctgaggaagagatatgatcatgttatgagcatgataaggaattct
cagctttgtggacaggctatgattgcatatctgcagcaaaaggggtttcctgaagtggct
cttcattttgttaaggatgagaggacacggttcaatttggctctagaaagtggcaatatt
caaattgcagttgcatcagctaaggaaattgatgagagggaccattggtatagactagga
gttgaggcccttcgccaagggaatgcgggaattgttgagtatgcttatcagaggacaaag
aactttgagaggctctcttttctttatctcataactggaaatatggacaaattgaccaaa
atgttgaaaattgctgaagtgaagaatgatgtaatggggcaattccataatgctttgtat
ttaggtgatgttcgagaacgtattaagatattagagaatgccgggcacttgcctcttgct
tatattactgctactactcatgggctgcaggatgtagctgaaagattggcagccgagttg
ggagattctgttccatctttgccagaggggaagcaaccttcccttctgatgcccccaatg
cctgtcatgtgtggtggtgattggcctcttttgagagtcatgaaaggcatatttgaaggt
gggttggataatgttggcagaggtactgcagatgaagaagaagaggaggttgaaggtgat
tggggagatgaattggatatggttgatgtgaatggtttagcgaatggtgatgtgacagct
attatggaggatggtgaagttggtgaagaaaatgaggaggagggtggttgggatcttgaa
gatttggagctccctcccgaggcagaaactccaagggcttctgtcaatgctcactctgca
gtttttgtggccccaactcctggcatgccagtaagtcaaatatggacacagagatcatct
cttgctgctgaacatgctgctgccggtaattttgacactgcaatgaggttgttgaatagg
cagcttggaattcggaatttcattcctttgagatcaatgttccttgatctccacaccggc
agccacacctatctacgtgcattctcctctgctccagtggtatctctggctgtcgagcgt
ggttggaatgagtctgctagcccaaatgtccggggtccaccagcccttgtctacaatttc
tctcaaatggaagagaagctcagggctggttatcgtgccaccacagccgggaaatttact
gaggctcttcgtcttttcctgagtattctccacacaattccgcttattgtggttgaatca
agaagggaagttgatgaagtcaaagagctgattgtcattgtcaaagaatatgtcttgggt
ctgcaaatggagcttaagaggagagaaattagggacgatccagtgcgccagcaggaactt
gcagcctacttcactcactgcaatcttcaaatgcctcacttgcggctcgccttactgaat
gcgatgactgtttgctacaaggcaaagaaccttgctactgcagctaactttgctcggcgg
cttctagaaaccaatcccactgttgaaaaccaagcaaagatggcaaggcaagttctgcag
gctgctgagaggaacatgatagatgcttctgagctaaactatgatttcagaaacccattt
gtggtctgtggagcaacatatgtgcctatataccgagggcagaaggatgtctcttgtcca
tactgcagctctcgttttgtgccaagccaggagggccagctttgtactgtgtgtgatctt
gctgtggttggagcagatgcttcaggattactgtgctccccatctcaggtgcggtga
DBGET
integrated database retrieval system
