Eucalyptus grandis (rose gum): 104453659
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Entry
104453659 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104453659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104453659
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104453659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
104453659
NCBI-ProteinID:
XP_010066572
UniProt:
A0A059BEG9
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Position
7:44752845..44764970
Genome browser
AA seq
1492 aa
AA seq
DB search
MSYEEEVLMRDVANAGIVLSDRIGREAASHTDLEEALEASRYVSHPYSTHPREWPPLVEV
SETWELPPVLIERYNAAGGEGTALCGIFPEIHRAWASVDNSLFLWRFDRWDGQCPEFNVE
EQAICAVGLCKSKPGIFIEAIQYLLILATPLELILVGVCSSGGADGTDPYSEVSLQLLPE
YTIPSDGVTMTWITCTEKGRIFLAGRDGHIYELLYTTGSGWHKRCRKVCVTAGLGTVISR
WVVPNVFKFAAVDPIVEMVFDNERQILYARTEEMKVQVFVLLPNGDGPLKKVTEEKNLIN
QRDAHYGARQSTTQRASTRPGKPSIVSISPLSTVESKWLHLVAVLSDGRRMYLSTSSSNG
NTGSVGGLGGFDASHYKPSCLKVVTSRPSPPLGVSGGLSFGNISLSARSPSEDLSLKVES
AYYSTGTLVLSDSSSPTVSSLLIVNKDSSTQSSSSGALGTSVRSSRALRESVSSLPIEGR
MLSVADVLPXPDTAATVQSLYSELEFCRIENSGESSEKISGKLWARSDLAIQHILPRRKV
VVFSTMGLMEVVFNRPVDILRRLFESSSPRSVLEDFFNRFGAGEAAAMCLILAGRIVDSE
NIISNAVAEKAAESFEDPRLVGVPQLEGSGGLSNTRTASGGFSMGQVVQEAEPVFSGAHE
GLCLCSSRLLYPVWELPVMIKKGGFGSSADVPSESGVIVCRLSFGAMQILENKLRSLEKF
LRSRRDQRRGLYGCVAGLGDWTGSILYGTHPESGVGDRSLMRNLFGSYSRNVDSNGSATA
NKRQRLPYSPAELAAMEVRAMECIRQLLLRSSEALFLLQLLSQHHLTRLVQGFDSSFQQS
LVQLTFHQLVCSEEGDRIATRLISVLMENYTGPDGRGTVDDISARLREGCPSYFKESDYK
FFLAVECLERAAVTSDIEERVNLAREAFNSLSKVPESADLQTVCKRFEDLRFYEAVVRLP
LEKAQALDPTGDAMNDQVDAAVREHALAKREQCYEIIISALRSLKGEASHREFGSPVKPV
AARSILDQASRKKYICQIVQLGVQSPDRLFHEYLYRAMINLGLENELLEYGGPDLVPFLQ
SAGRQTIQEVRAVSGVLSATSPSGQLGGAIQSNQAKYFDLLARYYVSKRQHVLAAHVLLR
LAERRSNNAGDALTLEQRFQYLSNAVLQAKNASANDGLPGSNQTFDSGLLDLLEGKLAVL
RFQIKIKEELEAIASRLESSQGMSDSAPADDGMTEDITYAGAAREKARELSLDMKSITEL
YNEYAVPFELWEVCLEMLYFANYSGDPDSSIVRETWARLIDQAISCGGIAEACSVLKRVG
SHMYPGDGAVLPLDTLCIHLEKAALERLNSGVESVGDEDVARALLAACKGSTEPVLNTYD
QLLSSGAILPSPSLRLRLLRSVLAVLREWAMSTFAQRMNTSITGASLIMGSYSFEQTAVI
NQGVRDKIANAANRYMTEVRRLALPQSQTEPVYQGFRELEESLMRPFSFDRL
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgaagaggaggtcttgatgcgggacgtcgccaacgccgggatcgtcctgagc
gaccgcatcggccgcgaggccgcttcccacaccgacctcgaggaagccctcgaggcctcc
agatacgtcagccatccttactcgacccaccccagggagtggcctcctttggtagaggta
tcggagacctgggagttaccacctgtactcattgaaagatataatgctgctggtggggaa
ggaacagctttatgtggaatttttccagaaatacacagggcatgggcatcggtcgataat
tctttatttctttggcggtttgatcggtgggatggtcaatgtcctgaattcaacgttgag
gaacaagctatatgtgctgttggcctctgtaaatccaaacctggcatctttattgaggcc
atccagtatctattgattttagccacgcctcttgagttgattcttgttggagtatgtagc
tctggaggagctgatggcaccgatccatattctgaggtctctctacagcttctgccagaa
tatacaattccatctgatggagttaccatgacatggatcacctgtactgagaaaggtcgt
attttcctggctggccgtgatggacacatttacgaacttttatacaccactggttctggc
tggcacaaacgctgtcgaaaggtttgcgttactgctggtttaggtaccgttatttcaagg
tgggttgttccaaatgtatttaagtttgcagcagtggaccctattgtagaaatggttttc
gataatgaaagacaaattctgtatgcacggacagaagaaatgaaagtgcaggtttttgtt
ctattaccaaatggagatgggccattgaagaaagtaacagaagaaaaaaatcttataaat
cagagggatgcacattatggagctagacaatcaactactcagagagcctcaactcgacca
ggaaagccctcaatagtttctatttcgcctttatcaacggttgaatcaaagtggctacac
ctcgttgcggtattatcagatggaagacgaatgtacctttcaacttcatcatctaatgga
aacactggtagtgtcggtgggctgggtggatttgacgcaagccattataagccaagctgc
ttaaaagtagtaacatctagaccttcccctcctttgggggtcagtggtggcctttccttt
ggaaacatatctctctcagctagatctcctagtgaggatctctcactgaaggttgaatct
gcctactattccacagggactcttgtcctttctgattcatcatcacccactgtctcttct
cttctcattgtgaacaaggattcaagcacacaatcatcttcatcaggtgcattaggaaca
agtgtaagaagttctcgtgcattacgggaatctgtttcttccctacccattgaaggtcga
atgctttctgtggcagatgttctacccncaccagataccgcagccactgttcagtcactg
tattcagaacttgagttttgtaggatcgaaaattcgggggagtcctcagaaaagatatct
gggaaactttgggccagaagtgaccttgcaatacaacacatattgcctaggagaaaagtt
gttgtattcagcacaatgggcttgatggaagttgtttttaacaggcctgtggacatattg
agaaggttgtttgagtccagctctccgagatctgttttggaagacttcttcaaccgattt
ggagctggtgaggcagctgcaatgtgtctgatactagctggcaggatagttgattctgaa
aatattattagcaatgctgttgctgagaaggctgccgagtcttttgaggatccaagactt
gtgggagtaccacagcttgaaggtagtggtggattgtccaatacaagaactgccagtggg
ggatttagcatggggcaggttgtacaagaggctgagcctgtattttctggtgcccatgaa
gggctttgcttgtgctcatcaaggttgctgtatccagtgtgggagcttcctgtcatgatt
aagaaagggggctttggttcctctgctgatgtgccgtcggaaagtggtgtaattgtctgt
agactttcctttggggctatgcaaattctcgaaaacaagctgcgttcattggagaagttt
ctgaggtccagaagggaccagaggaggggactttatgggtgtgtggctggtctaggagac
tggacaggctctatcttgtatgggacacatccagaatcaggggtcggtgataggagtctt
atgagaaatttatttggttcttactctcggaatgttgattctaatggtagtgcgacagcc
aataaaaggcagcggctaccgtatagtcctgcagagttggctgctatggaggtgcgagca
atggaatgcatcagacagttgcttctcagatctagtgaagcgttatttttgcttcagctt
ctttcccaacatcatttaacacgcttggttcagggatttgattctagttttcagcagtcc
ttggttcagctaaccttccatcaactggtttgctctgaggagggcgaccgcattgccaca
aggcttatatctgttctaatggagaattatactggtcctgatggtaggggaacagtagat
gacatcagtgccagattgcgtgagggttgtccaagttacttcaaagagtccgattacaag
tttttcttggctgtggaatgtcttgagagagctgctgtaacttcagacattgaggagagg
gtgaaccttgcaagggaggccttcaattccttgagtaaagttccagaatctgctgacttg
caaaccgtctgcaaaagatttgaggacttaagattttatgaagctgtggtgcgtttgcct
ttagagaaggcacaagctctcgaccccactggtgatgctatgaatgaccaagttgatgca
gcagttcgtgaacatgcacttgctaagcgggagcaatgctatgaaattatcatcagtgcc
ctgcgttctctgaaaggcgaggcttcacacagagaattcggttcccctgttaagcctgtt
gctgcacggtcaatccttgatcaggcttctcggaagaaatatatctgccaaattgttcaa
cttggagttcagtcacctgatcgattatttcatgagtacctgtatcgtgctatgatcaat
ttgggcctggaaaatgaattgttggaatatggaggcccggatttggtaccttttcttcag
agtgcaggccggcaaactatccaagaagttcgagctgtttctggggtattgtcagctact
tctccatcaggtcaacttggtggagctatccaaagtaatcaggcaaagtattttgatctt
cttgcacggtattatgtctcaaagaggcagcatgtgcttgcagctcatgtcttgcttaga
ctggcagagaggcgatcaaacaatgcaggggatgctctgactctagagcaaaggtttcag
tacctcagcaatgcagttttacaggcaaagaatgcaagtgcaaatgatggcctgccaggt
tctaaccagacctttgacagtggactgctagatttgcttgaggggaaactcgcggttctc
cgatttcaaataaagattaaggaggaacttgaggctatagcttccaggttagaaagctcg
caaggcatgtctgattctgccccagctgatgatggcatgaccgaggacattacttatgct
ggagctgcacgagagaaggccagagagttatcattagatatgaagagcataacggagctt
tacaatgaatatgcagttccatttgagctttgggaggtttgtctggagatgttgtacttt
gcaaactattctggcgatcctgatagcagcattgtaagagaaacctgggccagattaatt
gatcaagctatatcatgtggtggtattgctgaagcttgttcagtgctgaagagggttggt
tctcacatgtaccctggagatggagctgttttacctttggacactctctgcatccacctt
gagaaagctgcgttggagagattgaattccggagttgaatctgtcggggatgaagatgtt
gcaagggctcttcttgctgcttgcaagggttccactgagcctgttttaaacacatatgat
caattgctttcaagtggagctattttaccatcacctagcctcaggttaaggcttcttaga
tcagtgttggcagtgcttcgtgaatgggcaatgtctacatttgcacaaagaatgaataca
agcatcacgggagcttcattaattatgggctcctactcatttgagcaaacagcggtaata
aaccagggggttcgagataagattgctaatgctgctaacaggtacatgactgaggttcga
aggttagcccttccacagagccaaacggagccggtttatcaaggttttagagaactcgaa
gaatctctcatgagacccttttcctttgatcgactttga
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