Eucalyptus grandis (rose gum): 104454050
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Entry
104454050 CDS
T03547
Name
(RefSeq) transcription elongation factor TFIIS isoform X1
KO
K03145
transcription elongation factor S-II
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104454050
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104454050
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF1198
HVO_0758
Motif
Other DBs
NCBI-GeneID:
104454050
NCBI-ProteinID:
XP_039167822
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Position
1:complement(13867378..13871072)
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AA seq
385 aa
AA seq
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MDKELVELFERAKKAADAAAGDGVSSSGPEVSRCVDSLKRLKSFPVSYDALVATQVGKRL
RHLTKHPMETIKTMAADVLEIWKKIIIDETAKNKKKSGNDDKLLQKNEKPDGIKVEKGQK
ADAVKVDKFSHVETVKVEKTYRGDSTKLGRVSSSQTTKVEKNVVDTNALMSENNGREEGI
KVERIFKEEKQPLNIKKPSGRNAPPKLTALVKCDDSLRDKVRELLVEALSKVASEVDDDM
KDEVNACDPIRVAVIVESIMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVK
PERLITMTPDEMASDQRQRENHQIKERALFDCERGGPPKATTDQFKCGRCGQRKTTYYQL
QTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggagctggtggagctcttcgagcgggccaagaaggcagccgatgccgcggcc
ggcgacggggtgtcgtcgagtggccccgaggtttcgcggtgcgtggactcgctgaagcgg
ctcaagagcttcccggtgtcgtatgacgcccttgttgccacccaggttgggaaacggctt
aggcacctaacaaaacatcctatggaaacaatcaaaacaatggctgcagatgtgcttgag
atttggaagaagataatcattgatgagacagccaaaaataaaaagaagtccggcaatgat
gataaattgttgcagaaaaatgagaaaccagatggtatcaaagttgagaaggggcagaag
gcagatgcagtaaaggtcgataaattttcacatgtagaaacagtgaaagttgagaaaact
tacagaggtgattcgaccaagttgggtagggtttcaagttctcagaccaccaaagttgag
aaaaatgttgttgacacaaatgctctaatgtctgagaataatggcagagaagaaggtatt
aaagttgagcgtatattcaaagaggagaaacagccactgaatattaagaaaccatcagga
aggaatgctcctccgaagttgacagcactggtcaagtgcgatgattcccttcgtgacaaa
gttagggaactacttgttgaggcactgtctaaggttgctagcgaggttgacgatgatatg
aaggatgaagtaaatgcatgtgatccaatccgagtcgctgtcattgttgaatccattatg
tttgagaagatgggtcggtccaatggaacccaaaaattcaaatatcgatccatcatgttc
aacatcaaggacccaaacaatccggacctaagaaggaaagttcttcttggggaggtcaaa
ccagagaggctcatcacaatgaccccagatgaaatggccagtgatcaaaggcagcgtgag
aatcaccaaattaaagagagagctttgttcgactgtgaacgtggtggcccaccaaaagcc
acaactgaccagttcaagtgtggtcgctgtggccagcgaaagactacttattatcagttg
caaactaggagtgcagatgagcctatgacgacttttgtgacttgtgtaaattgtaataac
cactggaagttctgctga
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