Eucalyptus grandis (rose gum): 104454054
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Entry
104454054 CDS
T03547
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104454054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104454054
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104454054
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
104454054
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104454054
Exosomal proteins of colorectal cancer cells
104454054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
104454054
NCBI-ProteinID:
XP_010067077
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Position
7:complement(51106303..51112170)
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AA seq
458 aa
AA seq
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MAGAALPKAELTTSGRPILFPNEIECSLLSNVELEPEGSPPLSSSIHLRSSFMILTTHRL
IFVSDSSSAAASASAAATANAASYVPLASVAHIFSLKKSIKSMFASPRLKFQLSVGSDGR
VGGPAARSLVVTLVMRGKDDVEAFVDKFRQNWGARAWEREKESESASSGSSSIVESNASS
SGYDSRGMRVVGVAGILRREQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRSKLL
SAPSQAGSSNDEELGSKEEMQEWLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLER
SGGMINLIDMYCLFNRARGTELISPEDLLRACSLWEKFDVPVMLRKFDSGVMVIQNKSHS
DEEVFARIKSLITRPDALQMGVSAGDAAMTLGIAPAMAKEHLLTAESRGLLCRDVSPDGF
RFYINLFPEIPTDDIYLVKDQGIYATWIKCASSTSRLE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggccggagccgccctccccaaggcggagctgaccaccagcggccgcccgatcctattc
cccaacgagatcgagtgctctctcctctccaacgtcgagctcgagcccgaaggctcgccg
ccgcttagctcctccatccacctccggtcctccttcatgatcctcaccactcaccgcctc
atcttcgtctccgactcctcctccgccgccgcctccgcctccgccgccgccaccgccaac
gccgcctcctatgtccccctcgcctccgtcgcgcacattttctcgctgaagaaatcgatc
aagtcgatgttcgcgtcgccgcggctcaagttccagctgtccgtggggtcggacgggcga
gtgggcggcccggcggcgaggtcgctcgtggtgacgctggtgatgagagggaaggatgac
gtggaggcgtttgtggacaaattcaggcagaattggggcgctagggcttgggagagagag
aaggagagcgagagcgcgagttcggggtcgagttcgattgtggagtcgaatgccagttcg
agcgggtacgattcgagaggaatgagagtggttggggtggcaggtatactgaggagagaa
caggagatgtgggagagcactgataagagcttgcaggacgctttccaggacttgaatgcg
ctcatgagtaaagcaaaagagatggtgatgctagctgagaaaatgaggtcgaaacttttg
tctgccccatctcaagctggatcatccaatgacgaggaattaggttcaaaagaagaaatg
caagagtggttgttgagtgttggtattgtatctccagttacaaaagagtcggcgggtgct
ttgtatcaccagcaattatcccggcagttagcagattttgtaaagattcctcttgagagg
tctggaggaatgattaatctaattgacatgtactgcctttttaaccgggctcggggcaca
gaactgatttctcctgaggatctgttgcgagcatgttctctgtgggagaagtttgatgtt
cctgtaatgcttcggaagtttgatagtggagtaatggttatccagaataagtctcacagc
gatgaagaggtttttgctagaatcaaatcactcataacacggcctgacgcccttcagatg
ggtgtaagtgctggtgatgctgccatgaccctaggaattgctccagcaatggccaaggag
cacctcttaactgctgagagccgaggtttattatgccgggacgttagccctgatggcttt
cgtttctacattaatctatttcctgagattcctacagatgacatttacctggtgaaagat
cagggaatctatgctacatggatcaagtgtgcatcttctacttcaaggttggaatga
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