Eucalyptus grandis (rose gum): 104454406
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Entry
104454406 CDS
T03547
Name
(RefSeq) clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04142
Lysosome biogenesis
egr04144
Endocytosis
egr05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104454406
04142 Lysosome biogenesis
104454406
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104454406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104454406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104454406
Membrane trafficking [BR:
egr04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104454406
Exosome [BR:
egr04147
]
Exosomal proteins
Proteins found in most exosomes
104454406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
CFAP70_TPR_C
Motif
Other DBs
NCBI-GeneID:
104454406
NCBI-ProteinID:
XP_010067547
UniProt:
A0ACC3K989
LinkDB
All DBs
Position
7:56960397..56972739
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAANAPITMKEALTLPSLGISPQFITFTHVTMESEKYICVRETAPQNSVVIIDMSMPMQ
PLRRPITADSALMNPNSRILALKAQLSGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
TPKLLGLVTQTSVYHWTIEGDAEPVKMFDRTANLVNNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVEQQRSQALEAHAASFATYKVPGNENPSTLISFATKTVNAGQIAS
KLHVIELGAQPGKLSFTKKQADLFFPPDFGDDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPVFLTAEASSVGGFYAVNRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAEQLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
SGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKIFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLIDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIES
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWEKVLDPENSYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAFRVEEEAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAENANVYHDLVKYLLMVRQKTKEPKVDGELIFAYAKIDRLGEI
EEFILMPNVANLQNVGDRLYDEGLYEAAKIIFAFISNWAKLASTLVKLGQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQMCGLNIIIQVDDLEEVSEYYQNRGYFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRVEHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAIETASQSGD
RELAEELLVYFIEKGKKECFASCLFVCYDLIRADIVLELAWMNNMIDFAFPYLLQFIREY
TSKVDELVKDKIETQNEVKTKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMGGPGMGGMG
AGFAPPPMGGMGMPPMPPFGMPPMGSY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccaacgctccgatcaccatgaaggaggccttgacgcttccgagcctgggc
atcagtccacagttcatcacctttacgcatgtcacgatggaatccgagaagtacatctgc
gtgcgcgaaacggcacctcagaatagcgtggtcatcatcgacatgagcatgcctatgcaa
cctttgaggaggcctattactgcggactcagcactgatgaacccaaattctagaattctc
gctttgaaagcccaactttccggaaccactcaagatcacttgcaaatattcaacattgag
atgaaagcaaaaatgaagtcttatcagatgccagagcaggttgtcttttggaagtggatt
actcccaaattgttgggtcttgtcacccaaacctcggtatatcattggacaattgaaggt
gatgctgagcctgtaaagatgtttgacagaacagctaatcttgtcaacaaccagataata
aattatcgatgtgacccttccgaaaaatggttggttttgattggaattgctcctggttcg
cctgagcggccacaactggtgaaggggaatatgcaacttttctctgtggagcagcagcgt
agtcaagcccttgaagcacatgctgcatcatttgcaacttataaagttcctgggaatgag
aatccttcaactctcatctcctttgcaacgaagactgttaatgctggtcaaattgcatca
aagttacatgttatcgagctgggtgcccaaccagggaagctgtcttttacgaagaaacaa
gcggatcttttttttcctcctgattttggtgatgattttccagtggcaatgcagatatcc
cacaaatacagtttgatatatgtgatcaccaaacttgggctgctatttgtctatgatttg
gagacagctactgctgtatacagaaacagaattagtccagatccagtatttctaactgca
gaagcttcatcagttggcggtttttatgccgtaaacaggcgtggccaggtcttattggct
actgtaaatgaggcaacgattgtgccttttgttagtggccaactgaacaacttggagctt
gctgtgaatcttgcaaagagaggaaatcttcctggtgcagagcagctggttgtgcaacgt
ttccaagaactctttgctcaaactaaatacaaagaagctgctgagcttgctgctgagtct
ccgcaaggaatacttcgcaccccggacacagttgctaaatttcagagtgtcccagtgcaa
tctgggcaaacaccacctctattgcaatactttgggacccttttaaccaggggaaagctt
aatgcatttgagtcattggagctatcacgcctggtcgtgaatcaaaacaagaaaaacctt
cttgagaactggttggctgaggataagctggaatgcagtgaggaacttggggatcttgtg
aagaccgttgataatgacctcgcattgaaaatttatatcaaagccagagcaactccaaag
gtagttgcagcttttgctgagcggcgagagtttgacaaaattctgatatactcaaagcag
gttgggtacacgccagactatctcttccttttgcagacaattctgcgaacagatcctcag
ggagctgtcaactttgcattaatgatgtcccaaatggagggaggctgtccagtggattac
aacactataacagatctctttcttcagaggaatttgatccgagaagcgactgcattcttg
ttagatgtactaaaaccaaatttgccagaacatgcttttcttcagacaaaggttcttgaa
atcaatctggtcacttttccaaatgtagctgatgccatcttggctaatggcatgttcagt
cactatgatcgtcctcgaattgcccaactttgtgaaaaagcaggtctctttgttagggcc
cttcagcactatactgagctgccagatatcaaacgtgtcattgtgaacacacatgctatt
gagccacagtcacttgttgagttttttggtacactatcgcgagagtgggctttggagtgc
atgaaggaccttttgttggtcaatctgaggggcaatcttcagattatcgtacaggttgcc
aaggaatattgtgagcagttgggtgttgatgcatgcataaagatttttgaacaattcaag
tcgtatgaggggttgtattttttcctaggctcgtacttgagctccagtgaggatcctgac
attcacttcaagtacattgaggctgctgctaaaactggacaaattaaagaggtggaacgt
gtgactagagagtcaaatttctatgaccctgagaagactaaaaatttcctgatggaggcc
aagcttcctgatgcacggccactaattaatgtttgtgatcgttttggctttgtgcctgat
ctcacacattatctttacacaaataacatgcttcgatatatcgagggctatgtccagaag
gtcaaccctggaaatgctcctttggtagtggggcagctgatagatgatgaatgcccagaa
gatttcataaaaggcttaattctttctgttcgatctttgctaccagtggagcctcttgtt
gatgagtgtgaaaagaggaatcgactccgtttgctcactcagtttttggaacatctcgtg
agtgagggaagccaagatgtacatgtccacaatgctttgggtaaaatcatcatcgaaagt
aacaacaatccggagcattttctcacaaccaacccatactatgattcacgtgttgtgggt
aaatattgtgagaaacgcgatcctactcttgcggttgtggcttacaggaggggccaatgt
gatgaagaacttatcaatgtgaccaataaaaattccctgttcaaattacaagccaggtat
gtagttgaaaggatggatggtgatctatgggagaaagttctggaccctgagaactcttat
aggagacagctaattgatcaggttgtctctacggctttgcctgagagcaagagcccagaa
caagtttctgcagccgttaaagctttcatgacagctgatcttcctcatgaactgattgag
cttcttgagaagattgtgcttcagaattctgcttttagtgggaacttcaacttgcagaac
ttgcttatcttgacggccatcaaggcagatccatctcgagttatggattatgtaaataga
ctggataactttgatggaccagcggttggggaagtagctgtggaagcccaactttatgag
gaagcttttgcaattttcaagaagttcaatttgaatgtccaggctgtaaatgtcttactg
gataatattcaaagcattgagcgagcggttgagtttgcatttagggttgaggaagaggct
gtttggagtcaggtagccaaggcccaactaagggagggtcttgtcagtgatgctatcgag
tcatttatccgtgcagatgatgccactcagtttttggatgttattcgtgccgctgagaat
gctaatgtctatcatgacttagtgaagtaccttctgatggtgaggcaaaagacgaaagaa
cccaaggtggatggtgagctcatatttgcatatgccaagattgatagattgggtgagatt
gaggaattcatcctgatgccaaatgtcgccaatcttcaaaatgttggtgatcgcttgtat
gatgaaggcttatacgaagctgccaaaatcatttttgcctttatttctaactgggccaag
ttggccagcacacttgtgaagctgggacaattccagggagctgttgatgcagctcgaaag
gccaatagcgcaaagacatggaaggaagtttgcttcgcctgtgttgatgccgaggagttc
cgcttggcgcaaatgtgtggtctcaacatcatcatacaggtggatgatttggaagaagtc
agtgaatattaccagaacagaggatactttaatgagcttatctctctcatggagagtggt
ctgggtttggaacgtgcacatatgggtatttttaccgagttaggtgtcctttatgcaaga
taccgtccggagaagctcatggagcacattaagctgttcgcaactcggcttaatattccc
aagcttatacgagcttgtgatgagcagcagcattggaaagagctcacttacttatacatc
caatacgacgagttcgacaatgcagcaacgaccataatgaaccattctcctgaagcatgg
gatcacatgcagtttaaagatgtggtcgtcaaagttgccaatgttgaactctactacaag
gccgtgcacttctatttgcaagaacatcctgatttaatcaacgatgttctcaatgtgctt
gcacttcgtgtggagcatacacgtgttgttgacattatgcgaaaggctggtcatctgcgg
cttgtcaagccttacatggttgcagtacagagcaacaatgtttctgctgttaatgaagct
ttgaatgagatctatgtagaagaggaagattatgacagattgcgtgaatctattgatttg
catgataactttgatcagataggccttgcacagaagattgagaaacatgagcttcttgag
atgagacgtgttgctgcttatatctacaagaaggctggtagatggaagcaatcaatcgca
ttgtccaaaaaagataacctttacaaagatgccatcgaaacagcatctcagtctggtgac
cgtgaactagcagaagagttgcttgtttatttcattgaaaagggaaagaaggaatgcttt
gcttcgtgcctctttgtctgttacgatttaatcagggcagacattgtgcttgaactcgct
tggatgaacaatatgattgattttgctttcccatatctgcttcagttcatccgtgagtac
actagcaaagttgatgagcttgtgaaggacaagattgaaactcaaaatgaagtaaagaca
aaagagaaggaagagaaggatgtcattgcacagcagaacatgtatgctcagttgctgcct
ttagctttgcctgcacccccaatgcctggtatgggaggaccggggatgggggggatggga
gcaggttttgctcccccaccaatgggtgggatggggatgcctcctatgccaccgtttggc
atgccgcctatgggaagctactaa
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integrated database retrieval system