Eucalyptus grandis (rose gum): 104454421
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Entry
104454421 CDS
T03547
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104454421
Enzymes [BR:
egr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104454421
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
Pre-60S particles
Helicases
104454421
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Motif
Other DBs
NCBI-GeneID:
104454421
NCBI-ProteinID:
XP_010067561
UniProt:
A0A059BI41
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Position
7:complement(57396075..57401324)
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AA seq
599 aa
AA seq
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MEDERRDGDGDGDRNRALTATRFSDLEPPLSEPVLEALSQAGFEFCTPVQAATIPLLCSF
KDVAVDAATGSGKTLAFVVPLVEILRRSSSAPPKRHQVLGIIISPTRELSSQIYHVAQPF
ISTLSSIRSLLLVGGAEVKADMKKIEEEGANLLIGTPGRLYDIMDRMDTLDFKNLEILIL
DEADRLLDMGFQKQITSIVSRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAETK
QQDDSASSRDAAPSKTPSGLFLEYLECEADQKPSQLVDFLIKNKSNKIIVYFMTCACVDY
WGAVLPCLSALKGLSLVPLHGKMKQIVREKALASFTSLSSGVLLCTDVAARGLDIPGVDC
IVQYDPPQDPNVFVHRVGRTARLGRQGTAIVFLLPKEESYVEFLRIRRVPLQQRECNDNV
LDVVPLMRSAARKDRDVMEKGVRAFVSYIRAYKEHHCSYIFRWKELEVGKLAMGCGLLQL
PGMPEVKHHSLSTEGFTPVEDINLEEIKYKDKSREKQRQKNLRAKKEAPQKDPKTHKPNK
NANAASSVMRKKTAKQRRAAQTIEDEDEMAQEYRLLKKLKKGTIDEDEYAKLTGTEDLL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagcgccgcgatggcgacggcgacggcgaccgcaaccgagctctgaccgcc
acgcgcttctccgacctcgagccgcccctctccgagccggtcctcgaggccctgagccaa
gccggcttcgagttctgcacgccggtgcaggccgccacgatccccctgctgtgcagcttc
aaggacgtcgccgtcgacgccgccaccggctccggcaagaccctggctttcgtcgtccct
ctcgtggagatcctccgccgctcctcgtccgcgccgcccaagcgccaccaggtattgggg
attattatttcgcctaccagggaactatcatctcaaatctaccacgtggcgcaacctttc
atttctacactgtcaagtatcaggtccttgcttctagttggaggagctgaggttaaagca
gacatgaagaagatagaggaggaaggagcgaacttactaataggtacacctgggaggctg
tatgacattatggataggatggataccttggattttaagaatctcgagattctaattttg
gacgaggcagataggctcctagatatgggattccaaaagcagataacttccattgtatct
cgcttacccaaacttcgtagaactggccttttttctgctactcaaactgaggcagttgag
gagctggctaaagctggtttgcgaaacccggtgagggtcgaagttcgagctgaaacaaaa
caacaggatgattcagcatcatcacgggatgcagccccttcaaaaacaccttctggcctg
ttccttgagtatttggagtgtgaagcagaccagaaaccatcacaactcgttgatttcctt
attaagaacaagtccaacaaaattattgtttacttcatgacttgtgcctgtgttgactac
tggggagccgttcttccttgtctttcagctttgaaaggtctttctttggttcctctccat
gggaaaatgaaacagattgtaagagaaaaagcattggcttcatttacgtcgctttcaagt
ggcgttctcctatgtactgatgtcgcagctcgtggtctggatattccgggtgttgattgt
atagtgcagtatgatcctcctcaagatccaaatgttttcgtacacagagtcggccgcaca
gctaggctgggcagacaaggaactgcaattgtgtttttgttgcctaaggaggaatcttat
gttgaattcttgcggataagaagggttcctctccagcaaagggagtgcaatgataatgtg
cttgatgttgttcccctgatgcgctctgctgcaaggaaggaccgcgatgttatggagaaa
ggagttagagcatttgtctcatatattcgagcttataaggagcaccattgctcttatatt
ttcagatggaaagaacttgaggttgggaagttggcaatgggatgtggcttgctgcagctt
cctggtatgcctgaggtgaagcaccattcactttccacggaaggtttcactccagttgaa
gacattaacttggaggaaattaagtacaaggacaaatctagggagaagcagaggcagaag
aacttgcgagctaagaaagaggcaccacagaaagatccaaaaacccataagccgaacaag
aatgcaaatgccgcatccagtgtcatgaggaagaaaacggcaaaacagagacgtgcagct
cagacaattgaagatgaagacgagatggctcaagagtaccgccttttgaagaagttgaag
aaaggaactattgatgaagatgaatatgccaagttaacagggacagaagatttgctttga
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