Eucalyptus grandis (rose gum): 104454651
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Entry
104454651 CDS
T03547
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104454651
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104454651
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
104454651
NCBI-ProteinID:
XP_010067866
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Position
7:complement(59828848..59831419)
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AA seq
435 aa
AA seq
DB search
MTLSSSMNVHRLGLLVSVIFIILNSTGSLAVASKDWRGLASDTKSHLVKNHESFSRLHMM
RRLASASATKVVSVDDYGAKGDGGDDSEAFKKAWNVACSSEGAVLVVPKNRIYHLKPITF
SGPCKSNLTFKVYGRIKASVRLSDYDKDRAHWLMFNNLTDFRMEGGGFINGNGRKWWANS
CKINKTLPCKAAPTAMTFYECKNLRVADLIIQNAQQMHLLFQKCVNVIALNLLVSAPEKS
PNTDGIHVTGTQNILIKNCVIRTGDDCISIVSGSKNVQATDIVCGPGHGISIGSLGAGKS
TDYVSNVLVNRARLSGTTNGVRIKTWQGGSGYAKNITFQNISMRNVTNPIIINQNYCDQN
EPCPEQASAVQVSNVVYKNIKGTSASEVAINFDCSKSYPCKGILLQNIGLVSNSGESTKA
SSLNVRYTKMGNVYP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgtcgtcctccatgaatgtccatagacttgggctccttgtttcagtaattttc
atcatcttgaatagtaccgggagcctcgcggtggcttccaaagattggagaggccttgct
tctgatacgaagagccatctcgtgaagaaccacgagagcttctcaaggttacacatgatg
agaaggctcgcttcagcttcagcgacgaaggtggttagtgtggatgactatggagctaaa
ggcgacggaggagatgactcagaggctttcaagaaagcatggaatgtggcttgttcttcg
gagggagctgttcttgtagtccccaagaacagaatctatcatcttaagcccattactttc
tctggtccctgtaaatccaatcttacatttaaggtatatgggagaatcaaagcttcagtt
cgcctgtccgactacgacaaggatagagcacactggcttatgtttaataaccttacagac
ttcagaatggaaggcggtggcttcatcaatggcaacggcaggaaatggtgggctaattcc
tgcaaaatcaacaagacacttccatgcaaagcagcacccactgccatgacattctacgaa
tgcaagaacttgagagtagctgacctgatcatccaaaatgcgcaacaaatgcacctctta
ttccagaagtgtgtcaatgtaatagcactgaacttgttggtatctgcacctgagaaaagc
ccgaacactgatggaattcatgtcactggcacccaaaacatcctcatcaagaattgcgtc
atcaggacaggggatgattgcatttccatagtaagtgggtcaaaaaatgttcaagctacg
gatatagtctgtgggccaggacatggcataagcattgggagcctgggagctggtaaatca
acagattacgtttccaacgtgcttgtaaatagagcaaggctttcaggaaccacgaatgga
gtgaggataaagacttggcagggaggatctggctatgcaaaaaacatcacctttcaaaat
atttcaatgcgcaacgtgaccaaccctataatcataaatcaaaactactgtgaccaaaac
gaaccatgtccagagcaggcatcagccgtccaagtgagcaatgtggtgtacaaaaatata
aaagggacaagcgcatcggaggtggccataaattttgattgcagcaagagttacccttgc
aaagggattttgttgcagaacatcggtctggtgagcaattcgggggaaagcaccaaagct
tcaagtttgaatgttagatataccaagatgggaaatgtctatccatag
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