KEGG   Eucalyptus grandis (rose gum): 104455868
Entry
104455868         CDS       T03547                                 
Name
(RefSeq) THO complex subunit 4B
  KO
K12881  THO complex subunit 4
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03013  Nucleocytoplasmic transport
egr03015  mRNA surveillance pathway
egr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104455868
  09122 Translation
   03013 Nucleocytoplasmic transport
    104455868
   03015 mRNA surveillance pathway
    104455868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:egr03019]
    104455868
   03041 Spliceosome [BR:egr03041]
    104455868
Messenger RNA biogenesis [BR:egr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104455868
    TREX complex
     104455868
Spliceosome [BR:egr03041]
 Complex C
  Other components
   EJC/TREX
    104455868
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104455868
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_11 RRM_10
Other DBs
NCBI-GeneID: 104455868
NCBI-ProteinID: XP_010068886
LinkDB
Position
7:54959100..54961631
AA seq 240 aa
MSASLDMSLDEIIRRRQRSGARGPGPLRRPPPPYRGPPRSAPYSPPVLRLSSSALMAPAA
VPVWRQEELFGGASKPEAGTKLYVSNLDYDVTNEDIMLLFSDVGVVERCGVHYDRSGRSK
GTAEVIFARHSDALAAIKRYNNVQLDGKPMKIEIVGLRLFPPPPPPPLLPLPLPYSSVGR
FQSAYARGQGSGAEKLYQGGSSQGRPRVGGPGKAHFRKPSAKELDAELDRYHLEAMQSSS
NT seq 723 nt   +upstreamnt  +downstreamnt
atgtccgcctccctggacatgagcctcgacgagatcatccggcgccggcagcggtccggg
gcgcgcggccccggcccgctccgtcgcccgccgccgccgtaccgcggcccgccccgatcg
gcgccgtactcgcctccggtccttcgcctgagctcttccgcgctgatggcgccggccgcg
gtgccggtttggcggcaggaggagctgttcggtggagcgtccaagcccgaggcaggcacg
aagctgtatgtatcgaacttagattacgacgtcaccaacgaggatataatgttactgttc
tcggatgttggggttgtggaaagatgcggagtccactatgatcgaagcgggagatccaag
ggaaccgcagaagttattttcgcacggcattcagatgctttagcagctatcaagagatac
aacaatgtccaacttgatgggaagccaatgaaaatcgagattgttggactgagactcttt
cctcctcctcctcctcctcctctgcttccccttcctcttccatatagcagtgttggaaga
tttcagagtgcctatgcaagaggacaaggttctggtgctgagaaactgtatcaaggtggc
agcagccaaggacgtccaagagttggtggaccaggaaaagctcattttcgaaaaccatct
gcaaaagagcttgatgccgaattggacagataccatttagaagccatgcagtcgtcatcg
tag

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