Eucalyptus grandis (rose gum): 104456058
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Entry
104456058 CDS
T03547
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104456058
Enzymes [BR:
egr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104456058
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104456058
NCBI-ProteinID:
XP_010069078
UniProt:
A0A059AV41
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Position
8:5760688..5764851
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AA seq
450 aa
AA seq
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MVAQCQASCRLSTVVLVLLVAGAMSGAAIARDLSRSENLETGVLRSSSSNYSSMASSSSK
EADRLNDQAVDDPEKVASMVDMIIRNSTERRNLGFFSCGTGNPIDDCWRCDPNWHLNRKR
LADCGIGFGRNAIGGRDGRIYVVTDPSDDDPVNPRPGTLRHAVIQEEPLWIVFKRDMVIQ
LKQELIMNSFKTIDGRGSNVHIANRACITIQFVTNVIIHGLHIHDCKPTGNAMVRSSPSH
FGWRTMADGDAISIFGSSHVWIDHNSLSNCADGLVDAVMGSTAITVSNNHFTHHNEVILL
GHSDSYTRDKAMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTI
NSQGNRYAAPVNPFAKEVTKRVDTATSQWKSWNWRSEGDLLLNGAYFTPSGAGASASYAR
ASSLGAKSSSMVGTITSGAGALPCHPNRAC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgcaatgccaggcctcgtgtcggctgagcacggtggttcttgtcttgctggtc
gccggagcaatgtctggagcagcgatcgcccgcgacttgtctcgatccgagaaccttgaa
acgggagtgctccggagctcgagctcgaactactcgtccatggcgtcatcgagctctaaa
gaggcggatcgcctgaacgatcaagcagtggatgacccagagaaggttgcttccatggtc
gacatgatcatcaggaacagcaccgaaagaaggaacttgggcttcttctcctgcgggact
ggcaatccgatcgacgactgctggcgctgcgacccgaactggcacctcaaccgcaagcgc
ctcgccgactgtggcatcggtttcggcaggaatgccatcggcggtcgtgacgggcgaatc
tacgtggtgactgaccccagcgacgacgacccagttaacccgaggccaggcacactgagg
cacgctgttatccaggaggagcccctgtggatcgtgttcaagcgcgacatggtgattcag
ctgaagcaggagctgatcatgaacagcttcaagaccatcgacgggcgtgggtcgaacgtc
cacattgcgaacagggcgtgcatcacgatccagttcgtcaccaacgtgatcatccacggc
cttcacatccacgactgcaagcccactggcaatgccatggtcaggagctcaccaagccac
ttcggctggcggaccatggctgacggcgatgctatatccatcttcgggtcgagccatgtc
tggatcgaccacaactctctctccaattgcgcggatggccttgttgatgccgtgatgggc
tcgaccgcgatcactgtttccaacaaccatttcacccaccacaacgaggtgattctgctc
ggtcatagcgattcttacacaagagacaaggcgatgcaagtgaccatcgcttacaaccat
tttggcgaaggactgatccagagaatgccgaggtgcagacatggctactttcatgtggtg
aacaatgactacactcactgggaaatgtatgccatcggcggaagcgccgaccccaccatc
aacagccagggcaatcgatatgccgccccggtcaacccctttgcgaaagaggtgaccaag
agggtggacactgctacgagccagtggaagagctggaactggaggtcggagggagatctc
ctgctgaacggcgcctatttcactccgtcgggtgctggggcgtcagccagctacgcccga
gcctccagccttggggccaagtcttcctccatggtcgggaccataacctccggcgccggt
gctctcccctgtcaccccaaccgcgcttgctag
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