Eucalyptus grandis (rose gum): 104456165
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Entry
104456165 CDS
T03547
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104456165
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104456165
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
EGF_Mua-3
NosD
Motif
Other DBs
NCBI-GeneID:
104456165
NCBI-ProteinID:
XP_010069207
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Position
8:247121..249696
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AA seq
401 aa
AA seq
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MAELIFNTCLSFLALALSIFMLLSELPSPANAASVQYNVVSLGAKADGKTDSSKAFLSAW
ASACKSTSAATVYVPQGQFFVQSASFNGPCKNSAITVRIDGTLVAPSDYNVNGKVGNWIL
FRDVTGLSVLGGTLDGQGTGLWACKSSGKSCPGGATNLEISNSQNILVSGLSSLNSQMFH
IVINACQNVKMQGVKVSASGTSPNTDGIHVGASTGVTILNSKIGTGDDCVSIGPGSNNLW
IENIACGPGHGISIGSLGKEQQEDGVQNVTINTATFTGTQNGVRIKSWARPSNSYARNIL
FQHAIMNNVQNPIIIDQNYCPDNSGCPNQASGVRVSDVTYQDIHGTSATEVAVKFDCSST
HPCTGIKMQDVKLTYRNQVATASCAHAGGTASGTEQPSSCL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcatcttcaacacttgtttaagttttctggcacttgccctcagcatcttc
atgttgttgtccgaattgccatcaccggcaaacgcagcttcagttcagtacaacgtagtc
tctctcggcgcaaaagccgacggcaagactgactccagcaaggccttcctgagcgcatgg
gcatcagcctgcaagtcaacaagcgccgccactgtctacgtgccccagggccagttcttc
gtgcagtccgcctctttcaatgggccatgcaagaactcggccatcacggtgcgcatcgac
ggcacgcttgttgcgccttctgactacaacgtgaacgggaaggtggggaactggatccta
ttcagggacgtgacggggttgtccgtgcttgggggaaccctcgacgggcaaggcacgggc
ctctgggcttgcaagagctccggcaagagctgccctggtggcgctacgaacttggaaatc
agcaactcccaaaacatattagtgagcggactcagctccctcaacagccagatgttccac
atcgtcatcaacgcctgccagaacgtgaagatgcaaggcgtgaaggtgtcggcctccggg
accagccccaacaccgacggcattcacgtcggcgcctccaccggcgtcaccatcctcaat
tccaagattgggacgggcgatgactgtgtctccattggccctggcagcaacaatctctgg
atcgaaaatattgcatgcggacccggacatggcatcagcattgggagtctgggcaaggag
caacaagaagacggtgtacaaaacgtgacgattaatacggccacattcaccggcacgcaa
aatggagtgaggatcaagtcgtgggccaggccgagcaacagttacgcgaggaacatcctc
ttccagcacgccatcatgaacaatgtccaaaatccgatcatcatcgatcagaattactgc
cccgacaactccggttgcccgaatcaggcttcgggtgttagagtgagcgacgtgacgtac
caagacatccacgggacatcggcaactgaggtggccgtgaagtttgactgcagctcaacg
cacccgtgcaccggaataaaaatgcaagacgtgaagctgacctaccggaaccaagtggcc
acagcatcctgtgcccatgctgggggcacagcttctggcacggaacagccctccagttgc
ttgtaa
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