Eucalyptus grandis (rose gum): 104456167
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Entry
104456167 CDS
T03547
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104456167
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104456167
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104456167
NCBI-ProteinID:
XP_010069209
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Position
8:305343..309226
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AA seq
401 aa
AA seq
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MAELIFITCLNYLVLALSIFMLLSESPSPAYAASVQYNVVSFGAKADDTTDSSKAFQSAW
ASACGSMRAATIYVPRGRFLVRSASFKGPCKNLAITVRIDGTLVAPSNCNVNGDAGNWIV
FRHVIGVSVIGGTLDGQGMDLWACKLSGKSCPSGATNLMISNSENILVSGLSSLNSQMFH
IVVSGCQNVKMQGVKVSNPGTSPNTDGIHITASTGVTIRNSKIGTGDDCVSIGPGTNNLW
IENIACGPGHGISIGSLGQDQEEDGVQNVTVKTVTFTGTQNGLRIKSWARPSNGFARNIL
FQHAIMNNVQNPIIIDQNYCPDNSGCPTQASGVRVSDVTYQDIYGTSATLVAVKFDCSSK
YPCTAIRMQDVKLTYWNQLATASCAHADGTASGLVQPSSCL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcatcttcatcacttgtctgaattatctggtccttgccctcagcatcttc
atgttgttgtccgaatcgccatcgccagcatatgcagcttcagttcagtacaacgtggtc
tcttttggtgcgaaagccgatgacacgaccgattccagtaaggccttccagagcgcgtgg
gcgtcggcgtgtgggtccatgagggccgccaccatctacgtgccacgggggcggttcttg
gtgcggtccgcctccttcaaagggccatgcaagaacttggccatcacggtgcgcatcgat
ggcaccctcgttgcgccttccaactgcaatgtgaacggggatgcagggaactggatcgtg
ttcaggcacgtgatcggggtgtcggtgattgggggaaccctcgacgggcaaggcatggac
ctctgggcttgcaagctctccggcaagagctgccccagcggcgctacgaacttaatgatc
agcaactccgaaaacatattggtgagcggactcagctccctcaacagccagatgttccat
atcgtcgtcagcggttgccagaacgtgaagatgcaaggcgttaaggtgtcgaaccctggg
accagccccaacactgacggcatccacatcactgcctccaccggcgtcaccatccgcaat
tccaagatcgggacaggcgacgattgtgtctccatcggccccggcaccaacaatctctgg
atcgaaaacattgcttgcggacccggacatggcatcagcattgggagcttgggccaggat
caagaagaggacggtgtacaaaacgtgacggttaagacagtcacattcaccggcacacaa
aatggattgaggatcaagtcatgggctaggccgagcaacggctttgccaggaacatcctc
ttccagcatgccatcatgaacaatgtccaaaatcccatcatcatcgatcagaattactgc
cccgacaactccggttgtcctactcaggcttcgggcgttagagtgagcgatgtgacatac
caagacatctacgggacatcggcaaccttggtggccgtgaagttcgactgcagctcaaag
tacccgtgcaccgcaataagaatgcaagacgtgaagctgacttactggaaccaactggcc
acagcatcttgtgcccatgctgatggcacagcttctggcttggtacagccatccagttgc
ttatag
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