Eucalyptus grandis (rose gum): 104456308
Help
Entry
104456308 CDS
T03547
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104456308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egr03400
]
104456308
Enzymes [BR:
egr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
104456308
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
104456308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
Sgf11
Cys_rich_KTR
RNF220
Motif
Other DBs
NCBI-GeneID:
104456308
NCBI-ProteinID:
XP_010069382
UniProt:
A0A059AW85
LinkDB
All DBs
Position
8:complement(4146937..4156107)
Genome browser
AA seq
980 aa
AA seq
DB search
MRRSPGTFPMLTGRESLVRLIGKRRRFLPNRHSLLSSASAFQSCLNLGTDEGGKIVSLEG
REGLSFPAREVKDLGDGVENGECASKTPASDWVTCPVCGKRVRGGDYGINLHLDTCLTRG
TKRKVTQRTLLQLNFSPRLKVKVCPVESDLEQSTVDVVCNNPHEDLVNGGHECDRVENGD
GFPENGDGLLLNGCARSLGSECQIARKVRSASLSPKKVATHCDISVDDEDIFGTVVDTFI
VGRKFSDEKELKLGMAISLLREPENVKDPSAIKVLSADSGCCLGYLPRSLAQYVSPLIEK
HCLSFEGSVTCLPNHNHDIVPIKICCHGMIPCGEGKHDDVDGIKCLWTSILQEVEAARKN
PPSMTKYQQNFSLLIHEVLIRSSNLFTDDEKLFMESFTSLLDDSQRLFVRLYSRKGPWFR
LSNISYPEISDALQAVNELSGKGYVVPFDCAEGLQTDEMMGILRVLTVSELREISCIPKK
KGSQNSTKKDLIASALCSYRDGLCPVLPSVLLDKAGVCVKISSRAETVFWRAERIFFLNG
EQDLSTFLLVDLGAVKYPTYNCTNSEQIFSSRSCLLDYEEAIEVAQLMDESLDQNDADQV
LRCLRIADSCVDLPSENVSRSSISGSEAAFISCFTASWVYSKVILLGISYLEREHRYQDA
INLLKRLLDCFISDGRRGYWTVRLSIDLEHLGFLDESLSVAEDGLLDPWVRAGSRIALQK
RVLRLGKPPRRWKIPRSFEITKWKIKEVHVQGRPLNCEMGKKSRFYGEDGEQCGVEQLAL
QYYANEGGCWSGVHTESGIWLTIFGLLMWDVIFSDVPNVFRTKFQTAPLDLETDGFFLAR
KGLIETHLQNIHDGMAEEILITSWESHLGTACRGVNWDRHSLSELRAAVTCVGGPCLASL
CRLLSQDYRSWSSGMPDLLLWRFHGEYRGEAKLVEVKGPNDRLSEQQRAWLFILMECGFN
AEVCKVTPPLPLEPNTQNIS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgaggagatcgcccggcaccttcccgatgctgacggggagggagagcctggtccgcctg
atcgggaagcgccggcggttcctccccaatcgccactcgctcctctcctccgcctctgct
ttccagagctgtctgaatctgggtactgacgagggtggaaagattgtgtctttggagggt
cgggagggattgtcgttcccggcgcgtgaagtgaaggatttgggagatggggttgagaat
ggagagtgtgcatcgaagacgccggcttctgattgggtgacttgccctgtttgtgggaag
agagtccgaggcggtgattacggcatcaatttgcatttggatacatgcttgaccagagga
accaaaaggaaagtgacccagcgcacacttttgcagttaaatttttctccacgattgaaa
gtgaaggtttgccctgttgagtcagacttggaacaatcgactgttgatgtagtttgcaat
aatcctcatgaagatttggttaatggagggcatgagtgtgacagggttgaaaatggggat
ggtttccctgaaaatggggatggcttgcttctaaatggctgtgctagaagtcttggcagt
gaatgccaaatagctaggaaggtcaggtcagcctcgctgtctcccaagaaggtggctact
cactgtgatatcagtgtcgatgacgaggatatatttgggacagttgttgatacatttatt
gttggtcgcaagtttagtgatgaaaaggaattaaaacttgggatggcaatctcccttttg
agagaaccagaaaatgtcaaggatccaagcgcgatcaaggttctatctgctgattctgga
tgctgccttggttatcttccccgttccttggctcaatatgtatccccacttatagagaag
cactgcttgagttttgagggaagtgtgacttgtcttccaaaccataatcatgacatcgtt
cccataaagatatgttgtcatgggatgataccatgtggtgaggggaagcatgatgatgtc
gatggtatcaaatgtttgtggacaagtattttgcaagaagttgaagcagcgaggaaaaat
ccacccagtatgacaaaatatcaacagaattttagtctactaatacatgaggtcttaatc
agaagttctaatctttttacagatgacgagaaactgttcatggaatcattcacttcactt
ttggatgatagtcagaggctttttgtccggctttattcacggaaagggccatggttccgg
ttgtccaacatttcctatccggagatctctgatgctctgcaagctgtcaatgagctctct
gggaaaggatatgtggttccatttgattgtgcagaaggcctacaaacagatgaaatgatg
ggtatcttaagagtgcttactgtttctgaacttcgtgagatctcctgtataccaaagaag
aaaggcagccagaattcaacaaagaaggatcttattgcatctgctctctgttcgtataga
gatggattatgcccagttcttccaagtgtgcttctggataaagctggtgtgtgtgtaaaa
atatcctcgagagctgaaactgtcttctggcgtgctgagagaattttcttcctgaatgga
gaacaggatctgtctacatttcttctagttgatctgggagcagtcaaatatccaacttac
aactgcacaaattcagaacaaattttctcttctcgaagttgcctcctagattatgaagag
gctattgaagtagcacagttgatggatgagtcacttgatcagaatgacgcagaccaagtg
ttgagatgtttaaggattgcagactcttgtgtggatcttccttccgaaaatgtatctaga
tcatccatttcaggttcagaagctgcatttatttcatgcttcacagcttcttgggtctac
tccaaggtgattttgttaggaatctcctatcttgaacgtgaacataggtaccaggacgca
ataaatctactgaagcggcttttagactgttttatatctgacggaaggagaggatactgg
actgtaaggctgtctattgacttggagcatctgggattcctggacgagagcctttcagtt
gcagaggatggtctcttggatccatgggtgcgtgctggttcaaggatagcactgcaaaag
cgggttcttcgcttaggaaaaccaccgaggcgctggaaaattccccgttcctttgagatt
acaaaatggaaaattaaggaagttcatgtacaagggagacctttgaactgtgaaatgggg
aaaaagagcaggttctatggagaagatggagaacaatgcggagttgagcagcttgctcta
cagtattatgccaatgaaggaggttgctggagtggagttcatacggagagtggcatttgg
ttgaccatttttgggcttcttatgtgggatgttattttttctgatgtaccgaatgtcttc
cgcacgaaatttcagacggctcctttggatttggagacagatggcttttttctagcaagg
aagggcctcatagagacccatctgcaaaatattcatgacggcatggccgaggagattctt
attacatcatgggagtcacacttaggaactgcttgccgtggagttaactgggatcggcat
tccctctcagaactgcgtgcagctgttacttgcgttggtggaccttgtttggcctctctt
tgccggcttctctctcaggattaccgtagctggtctagtgggatgccagatttgttattg
tggcgctttcatggagaatatcgaggcgaagcgaagcttgttgaagtaaaaggtccaaat
gatagactctccgaacagcagcgggcgtggctattcattctgatggaatgtgggttcaat
gccgaggtatgtaaagtaacgcctccactgccgttggagccaaatactcaaaatatcagc
tga
DBGET
integrated database retrieval system
