KEGG   Eucalyptus grandis (rose gum): 104456397
Entry
104456397         CDS       T03547                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
egr  Eucalyptus grandis (rose gum)
Pathway
egr03030  DNA replication
egr03410  Base excision repair
egr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:egr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104456397
   03410 Base excision repair
    104456397
   03420 Nucleotide excision repair
    104456397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:egr03032]
    104456397
   03400 DNA repair and recombination proteins [BR:egr03400]
    104456397
Enzymes [BR:egr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104456397
DNA replication proteins [BR:egr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    104456397
DNA repair and recombination proteins [BR:egr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      104456397
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT
Other DBs
NCBI-GeneID: 104456397
NCBI-ProteinID: XP_010069478
UniProt: A0A059AW13
LinkDB
Position
8:complement(10143553..10148423)
AA seq 531 aa
MSAAMKKKVQRKFKMRGYTLRVDALDAVLSFASRFAGAEDDALDLLLDQLDHESLKSSII
DKDPVNRVVSLLLEAEAAVEESPDAACEGRGSALRVIDAFLVPKFRYDPVKKIFYEHTGS
LPIHGEASTKAKLYKDRFLLLYQRLSRDQHFAKPAFETETTEFGSCEISPIQSLVGQTGR
RWVMGVISQLEDGHFYLEDLTASVEINLSDAKVTTGFFTENTIVVVEGQMLLEGIFKIFT
CGFPPLEERDKSLKALAGLDFFGGGALTKEETLRLTELEKRAVNDMFIIMSDVWLDNEEA
MGKLEMVLDGFENEEVVPSLFVLMGNFCSRPCNLSFHSYSSIRAQFGKLGQMIESHPRLK
EHSRFLFIPGPEDAGPSTVLPRCALPRYITEEFQNRIPNAIFSSNPCRIKFYTQEIVFFR
QDLLXKMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPLVVQPVIWNYDHSLHLYPT
PHTIVLGDKSEQKAFSYTGITCFNPGSFSNDGTFVAYRPCTREVELSALPA
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgagcgcggcgatgaagaagaaggtgcagaggaagttcaagatgagggggtacaccctc
agggtggacgccctcgacgccgtcctctccttcgcctcccgcttcgccggcgccgaggac
gacgccctcgacctcctcctcgaccagctcgaccacgaatccctgaagtcttcgatcatc
gacaaggatccggtgaaccgggtggtgagtctcttgctggaagcggaggccgccgtggag
gagagccccgacgcggcttgcgagggccggggatccgcgctccgcgtgatcgacgccttc
ctggtccccaagttccgttacgatccggtcaagaagatcttttacgagcacactggaagc
ctgcccattcatggcgaggcctctacgaaagcgaagctgtataaggataggtttctgctg
ctgtatcagagactctctcgcgatcagcatttcgcgaagcctgcattcgaaaccgaaaca
accgaatttggaagttgcgagatatctccaatccaatctcttgtcgggcaaactggacgg
agatgggtaatgggtgtgatttctcagttggaggatggccatttctacttggaagacctc
actgcttctgtagagatcaatttgtccgatgcaaaggtaacaacaggtttctttactgag
aataccatagttgtagtagaaggtcagatgctgctggaggggatttttaagatctttacg
tgtggatttcctcctttagaagaacgagataagtctttgaaagcacttgctggacttgat
ttttttggaggcggtgcattaaccaaagaggagactctcagactcacagagttagaaaaa
agagcagttaatgacatgttcatcatcatgtctgacgtttggctagacaacgaggaggct
atgggaaaactagagatggtcctcgatggttttgagaatgaggaggtagttccttcattg
tttgtgttaatgggaaacttttgctctcgaccctgcaacctttcttttcattcctacagt
agcatcagagcgcagttcggcaagcttgggcagatgatcgaatcccacccacgtctgaag
gagcatagtcggtttctgtttattccgggtcctgaggatgcaggtccctcaacagtttta
cctagatgtgctttgccaagatatatcacagaagagtttcagaatcgcattccaaatgcc
atattttcaagcaatccttgcagaatcaagttctatacccaagaaatcgtatttttccgc
caggatttactantcaagatgcgtcgctcgtgtctaatgcctccctccacagaagaaacg
agtgatcctttcgagcatttagttgctacaataacgcatcaaagtcatctatgccctctc
cctcttgtcgtgcaaccggtcatttggaattacgatcatagtctccatctgtatccaact
ccacacacgatagttttaggtgacaagagcgagcagaaggcgttcagttacacaggaatt
acttgcttcaatcctggttctttctcaaatgatggcacctttgttgcttatcgcccttgc
actcgagaagttgagttatcagccttgccagcataa

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