Eucalyptus grandis (rose gum): 104456424
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Entry
104456424 CDS
T03547
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104456424
04121 Ubiquitin system [BR:
egr04121
]
104456424
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104456424
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104456424
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104456424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-HC5HC2H
Zn_Ribbon_TF
DUF7573
zf-RING-like
IBR_1
Anti-TRAP
HypA
zf-Nse
A2L_zn_ribbon
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
104456424
NCBI-ProteinID:
XP_039155502
LinkDB
All DBs
Position
8:10876205..10881305
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AA seq
379 aa
AA seq
DB search
MASSGGRTGAGAGFGGGPQLYYCHQCRSTVSINRSPTADLVCPDCNGEFLEESESPDVSP
MLPPFFPFENFGSGGSAGSGSGSGGGMSFSSGAGLPGGGGMDDFSALFGGASAFGDGGGN
SNNPDAFNPLLFLNNYFQTLRAGGANIQFVIDNNTGGDSGGSFRFPGNINLGDYFIGSNL
EQLIQQLAENDPNRYGTPPASKTAINGLPVVKIDEESLASDNSQCAVCKDTFELGEEAKQ
MPCKHIYHSDCILPWLELHNSCPVCRHELPTDDPDYEQRNRGPQAQQVLGGRTQTDVSSD
LSGAPASGDSSQTPQTMERRFRISLPLPWPFNRTFGSPAETSDSGSGSGNNNGNNDGNSN
TGGGANRNFESETRQEDLD
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctctggcggcaggaccggcgccggcgccggcttcggcggcggcccgcagctc
tattattgtcaccagtgcagaagtacggtctcgatcaaccgctccccgaccgccgatctc
gtctgccccgactgcaacggcgaattcttagaggagtccgagagccccgacgtcagcccc
atgctcccccccttcttccccttcgagaacttcggcagcggcggctccgccgggtcgggg
tcggggtcgggcggcggcatgagtttcagctccggcgccggactccctgggggcgggggg
atggacgatttctcggcgctcttcgggggcgcctccgccttcggcgacggcggcggcaac
agcaacaatccggacgcgttcaaccccctcctcttcctcaacaactacttccaaacccta
agagccggcggcgccaacattcagttcgtcattgacaacaataccggcggcgacagcggc
ggctccttccgcttccccgggaacatcaacctaggcgactactttattggctccaatctc
gagcaactaatccagcaactcgcggagaacgatcccaatcgctacggcacgccccctgcg
tcgaagaccgcaattaatgggcttccggttgtcaagatcgacgaggaatcgctcgcctca
gacaattcgcagtgtgcggtctgtaaggacacgtttgagcttggtgaggaggcaaagcaa
atgccttgtaagcatatataccattctgattgcattttgccctggttggaattgcacaat
tcttgccctgtttgtagacatgaattacccactgatgatcctgattatgagcaaaggaat
aggggtccccaggcccagcaagttcttggtggtcggacccaaaccgatgtgtctagtgac
ttgtccggtgctcctgcgtctggagacagttctcagacgccacagacaatggagcggcga
ttcaggatttcgttgccacttccatggccgttcaacaggacatttggttctcctgcagag
acaagtgatagtggcagtgggagtggtaacaataatggaaacaacgatgggaattcaaat
actgggggtggcgcaaatcggaactttgaatcggaaaccagacaggaagatcttgattga
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integrated database retrieval system
