Eucalyptus grandis (rose gum): 104456625
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Entry
104456625 CDS
T03547
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00061
Fatty acid biosynthesis
egr00071
Fatty acid degradation
egr01100
Metabolic pathways
egr01212
Fatty acid metabolism
egr04146
Peroxisome
Module
egr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
104456625
00071 Fatty acid degradation
104456625
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
104456625
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
egr01004
]
104456625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
egr04147
]
104456625
Enzymes [BR:
egr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
104456625
Lipid biosynthesis proteins [BR:
egr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
104456625
Exosome [BR:
egr04147
]
Exosomal proteins
Exosomal proteins of breast milk
104456625
Exosomal proteins of breast cancer cells
104456625
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
104456625
NCBI-ProteinID:
XP_010069762
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All DBs
Position
8:13660969..13667489
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AA seq
667 aa
AA seq
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MDVQIKQMKVFAAKVEDGREGRDGKPSVGPVYRNLLAKNGFPPTDPNINTTWDIFRVSAE
KHPKNKMLGWRKIISGKPGPYAWKSYKEVYDEVLHIGSALRASGAEPGSRVGIYGANCPQ
WVMAMEACNSHSLVCVPLYDTLGPRAVNFILDHAEINFVFIQDKKVKQLLNPDCLSAKKL
KSIICFTSMAEGEKEEAVQTGTIPYTWDEFLQMGKENPSDILPPRPFDICTLMYTSGTSG
DPKGVVLTHENLASFVAGMDLFLEQFEDKMTVDDVYLSFLPLAHILDRAIEEYFFHKGAS
IGYYHGDLNALRDDLMELKPTFLAGVPRVFERIHESIKVAIEELNPVRQRIFNLLYRHKL
HWMNLGYKQKEASPLADCLAFRKVKAKLGGRLRLIVSGGAPLSTEIEEFLRVTSCAFVVQ
GYGLTETCGPTTLGFPDEMSLIGSVGAVSVYNEMRLEEVSEMGYNPLGNPPCGEICFRGK
MVFSEYYKNPELTRESIKDGWFHTGDIGEMLPNGSVKIIDRKKNLVKLSQGEYVALEYLE
NVYGVAPIVEDIWVYGDSFKSMLVAVVVPHEENTRKWAVANGYPGSFSELCSLTLLKEHI
LAEFRDIAQRNKLRGFEYIKGVILEPLLFDMERDLVTATLKKKRNKLLNHYQAQIDELYR
TLAGGRQ
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgcagataaagcaaatgaaggtttttgcggccaaggttgaggatggaagggag
ggccgagatggaaagccctcggtgggccctgtctatcgaaacctacttgccaaaaatgga
tttcctccgactgatcccaacataaatacaacatgggacattttcagggtatccgccgaa
aagcatcctaaaaacaagatgctcggatggcgcaaaataatcagtggaaagccaggacct
tatgcctggaaatcctacaaggaagtctatgacgaagtcttgcatatcggttctgcatta
cgtgcatccggagctgaacctggctccagagtgggaatttacggagcgaactgcccacag
tgggttatggcaatggaggcttgcaactcacacagtttggtatgcgtgcctctctacgat
accctcggtccacgagctgttaacttcatactggatcatgcggagataaattttgttttc
atccaagataagaaagtaaaacaacttctaaatccagattgcctttctgccaaaaagcta
aaatcgatcatttgctttacgtctatggcagagggcgagaaagaagaagcggttcaaaca
gggactataccatatacatgggatgagttccttcagatgggaaaggaaaatccgtcggac
attttgccacctcggccttttgacatctgcacactcatgtacaccagcggcaccagtgga
gatccgaaaggtgttgttctgacacatgaaaacctcgcatcttttgtagcagggatggat
ctctttttggagcaatttgaagataagatgacggtggacgatgtgtatctatctttcttg
ccgcttgctcacattcttgaccgtgccattgaggaatattttttccacaagggcgcttcc
attggctattatcatggggacttgaatgcactgagagatgatctgatggagttgaagccg
acgtttttggcaggcgtgcctcgagtattcgaaaggatacatgaaagcattaaagtggcg
atagaagaactcaatcctgtgaggcagaggatattcaatcttctctacaggcacaaacta
cactggatgaatcttggatataaacaaaaagaggcatcgccgttggcagattgcctggct
ttcaggaaggtaaaagctaagttaggtggcaggcttcgccttatagtatctggaggtgcg
ccactgagcactgagattgaagagttcctacgggttacttcctgtgcttttgtggttcaa
ggctatggcttgaccgaaacctgcgggccaacaactctcggatttcctgacgaaatgtcc
ttgattggatctgttggcgcggtgtccgtatacaatgagatgcgcctggaagaagtttcg
gagatgggctacaatccgctggggaaccctccgtgtggcgagatatgctttaggggaaag
atggttttttcagaatactacaaaaatcccgagttgacaagagaatctataaaggatggc
tggttccatacaggggacattggggaaatgcttcctaatggcagcgtcaagatcattgat
cggaagaagaatcttgtaaagctctcccagggagagtatgttgcgctggagtatttggaa
aatgtttatggagttgccccaatagtggaagatatttgggtatatggggacagcttcaaa
tcaatgctagtcgcagtcgtcgtaccgcacgaagagaacaccagaaagtgggcggtcgcc
aacggttacccggggtccttttccgaactttgttctctcactctgttgaaagagcacatc
ctcgctgagttcagagacatcgctcaacgaaacaagctgaggggcttcgagtacatcaaa
ggagtcatcctcgaaccgctcctcttcgacatggaaagagatctggtgaccgcgacgctc
aagaagaagagaaacaagctgctaaaccactatcaggcgcagatcgatgaactgtaccga
actttggctggtgggagacaatga
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