Eucalyptus grandis (rose gum): 104456647
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Entry
104456647 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35B
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104456647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104456647
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104456647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
104456647
NCBI-ProteinID:
XP_010069801
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All DBs
Position
3:19352984..19364800
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AA seq
792 aa
AA seq
DB search
MVLERPEDEEKWLAEGIAAIQQNAFYMHRALDANNLREALKYSALMLSELRTSNLSPHKY
YDLYMRAFDELRGLEMFFXDEGRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGVQHPIRGLFLRSYLSQVSRDKLPDIGSEYEGGGDTVMDAVEFVL
QNFTEMNKLWVRMQHQSQGPGRIREKQEKERSELRDLVGKNLHVLSQIEGVDLEIYKETV
LPGVLEQVVNCKDDLAQYYLMECLIQVFPDVYHLQTLEALLGSCSQLQPTVDVKMLLSQL
MDRLSNYAASSPDVLPEFLQVEAFAKLSSAIWKVIDAHTEMPVVGAISLYVSLLTFTLRV
HPDRLDYVDQVLGACVKKLSGKPKLEDRRATKQIVALLSAPIEKYNDVVRALTLPNYPRV
MEYLDSLTNKQMALVIIQSIMKNNTCIKEADKVEVLFELIEGLVKDVEGIAEDELDEEDF
NEEQNSVARLIHMLYNDDPEEMLKIICAVQKHIMGGGPNRLPFTVPPLVFSALRLVRQLQ
SQDGEVVGEELPATPRKLFQLLSQIIEALSSVPSPELALRLYLQCAEAAGDCDLEPVAYE
FFTQAFVLYEEEVADSKAQVTAIHLIIGSLQRMTVFGVENRDTLTHKATGYSAKLLKKHD
QCRAVYACSHLFWVDNHEGIKDGERVLLCLKRALRIANAAQQMASVTRGSAGPVTLFVEI
LNKYLYFFEKGNPQVTSSAIQSLVELIKNEMQSDSTTQDPASDTFFVSTVRYIQYQKEKG
GMMGEKYEPIKV
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggaaagacccgaggacgaggagaaatggctggccgaagggatcgccgccatc
cagcagaacgccttctacatgcatcgcgccctggacgccaacaacctgagagaagctctc
aagtactcggccctgatgctgtccgagctccggacttcgaatctctctccccacaagtat
tacgatctctatatgagagctttcgatgaactgagggggctggagatgttcttcnaggac
gagggcaggcacggcgtttccatagtcgatttgtatgagctcgtgcagcatgctggcaac
atattgccccgactctatctcctatgtactgtgggatctgtgtacatcaagtccaaggaa
gcacctgccaaggatatccttaaagatcttgttgagatgtgccgtggtgttcagcatcca
atacggggcctgtttttaagaagttacctatctcaagtcagtagagataagttacctgac
attggttctgaatatgaaggaggtggcgacactgttatggatgctgttgaatttgtgctg
caaaattttactgaaatgaataagctttgggttcgcatgcagcatcagtcgcagggtcct
ggtcggattagagagaagcaggaaaaagaaaggagtgagcttcgtgatcttgtagggaaa
aacctccatgttcttagtcagatagagggtgtggatcttgaaatatacaaagaaactgtt
cttcctggggtcttggagcaggttgtcaactgtaaagatgatcttgcccagtattatctg
atggaatgcctgatccaggtcttcccagatgtataccatttgcagacccttgaggcgtta
ttgggttcttgctctcagcttcagccaactgttgatgtcaagatgctgctgtctcagttg
atggatagattgtcaaattatgctgcctcaagcccagatgtattaccagaatttctgcaa
gtggaggcatttgctaagttgagcagtgccatttggaaggttatagatgcccacactgag
atgccagttgttggagcaatttctttgtatgtttctcttctcacatttactctccgtgta
caccctgatcggcttgattatgtggatcaagttctgggagcatgtgttaagaagctctct
ggcaaaccaaagcttgaagacagaagagcaacaaaacaaatcgttgcactcctgagtgct
ccaatagagaaatacaatgatgttgtcagagccttgacacttcctaattatccacgcgtc
atggaataccttgatagtttgacaaacaaacaaatggcattggttataattcaaagcatc
atgaagaataacacctgcatcaaggaggctgataaggttgaggtgttgtttgaattaatc
gaaggacttgttaaagatgtggagggaatagctgaggatgagcttgatgaggaagacttc
aacgaagagcaaaattctgttgctcgccttatacatatgctatataacgatgacccagaa
gaaatgcttaagattatatgtgcggtgcaaaagcacattatgggtggaggtccaaatcgc
ctgccttttacagttcctccgcttgttttttctgccctcaggttggtcaggcaattgcaa
agtcaagatggtgaagttgtgggagaagaattgcctgcaactcctagaaaacttttccag
cttttgagccagataattgaggctctttcatctgtaccatcacctgaacttgcactaagg
ttatatctgcaatgtgcagaggctgccggcgattgtgatcttgaaccagtggcttatgaa
ttttttacccaggcttttgtactatatgaagaagaagttgcggactccaaagcccaggtt
acagcaatacatttaattattgggagtctccagcggatgactgtatttggtgttgagaat
agagatactttaacacacaaggcaactgggtattctgcaaagcttctgaagaagcatgac
cagtgcagagcagtttatgcatgttcccaccttttctgggtcgacaatcacgaaggcatt
aaagatggagaaagggttctactttgtcttaaacgtgctttgagaatagcaaatgcagcg
caacagatggccagcgttacacggggtagcgctggcccagtcacgctttttgtcgaaatc
ttgaacaagtacctctactttttcgagaaaggcaacccacaggtcacaagctctgcaatt
cagagcctggttgagctaataaagaacgagatgcaaagcgattccacaacccaggatcca
gcttcagatacattctttgtcagcacagttcggtacatccaatatcaaaaagagaaggga
ggcatgatgggcgagaagtacgagccaattaaggtgtga
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