Eucalyptus grandis (rose gum): 104457036
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Entry
104457036 CDS
T03547
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104457036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104457036
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104457036
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
104457036
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
104457036
NCBI-ProteinID:
XP_018715512
UniProt:
A0A059AYJ7
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Position
8:complement(18193846..18197892)
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AA seq
327 aa
AA seq
DB search
MRGLHLPLTQTQKVRLQRALEKLEALSTKANSNASVTIADTIPVNYEDGFLKGHGTTELN
GEVVATVCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEVAPKRWRLDINYSQDAVLM
LSSINLPDGIQRRRTAEDELNMRSIFEENDVICAEVRGFQHDGLHLQARSQKYGKLQRGQ
LLSIPSYLVKRRKQHWHHLDEYGIDLILGCNGFVWVGEHVETKDEMLVDQADKPDSQTSK
TNDHSTSLEGQEQTYTPLETRQNICRIANAIRVLSMLGFVVTIEVVMEVVNLGVSQNMDT
HEMLGSEFCVLVAEREAERRSQKKNRG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagagggttgcatctcccgctgactcaaacccagaaggtgaggctgcagagagcgctc
gaaaagctggaggctttgtcgacgaaggccaactccaatgcctccgtcaccattgccgac
acgatccctgtcaactacgaggacggctttcttaagggccatggaaccactgagctcaat
ggcgaagttgttgctacggtttgtggagtagttgagcgagtcaacaagctggtctatgtt
cgtactctgcgagccagatacaagccagaggttggagacatcattgttggtcgcgttatt
gaggtagctccaaagcgttggcgactggatataaattatagtcaagatgctgtgttaatg
ctttcttcaattaatttgcctgatggaattcagaggcgacgaactgcagaggatgagctt
aacatgcgcagtattttcgaagagaatgatgtcatctgcgcagaagttcgtggctttcag
catgatggtctgcacctccaagcaagaagtcagaaatatggaaagcttcagcggggacaa
cttctctcgatcccttcttatcttgtaaagagacgaaagcagcactggcaccacctagat
gagtatgggattgacctaatactcggttgcaatggatttgtctgggtcggcgagcatgtg
gaaaccaaggatgaaatgttggtggatcaagcggacaagcctgattcacaaacttcaaaa
acaaatgatcactccacgagtcttgaagggcaagagcagacatacaccccattggagaca
aggcagaacatatgcagaattgcaaatgccatacgtgtcttatctatgttaggatttgtc
gtcacaatagaagtggtcatggaagtagtcaatctgggtgtctcccagaacatggacaca
catgagatgctaggatcggaattttgtgtattggttgcagaaagggaggctgaacggcgg
agccagaaaaagaacaggggataa
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