Eucalyptus grandis (rose gum): 104457039
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Entry
104457039 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104457039
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
egr04040
]
104457039
Membrane trafficking [BR:
egr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104457039
Ion channels [BR:
egr04040
]
Other channels
Mechanosensitive channel (Piezo)
104457039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
104457039
NCBI-ProteinID:
XP_039155214
LinkDB
All DBs
Position
8:complement(18161440..18184450)
Genome browser
AA seq
2480 aa
AA seq
DB search
MGHFISGVLLPLLLLAAALINWSLICLADLIAFLVFLFNVSKLGFRRQRPPWLLWSIIMF
SILVMLCESLFLIIWAIHGGRWSEADASWAKLFGFLTVHSWKKPSAIYFLALHLLAVTVA
FLQINWNRFGPIISPDSCWGSFVSVIQHLGSRLRIAFCLVLPAIQLVVGISYPSWISLPF
FVGSCVGLVDWSLSSNFLGLFRWWRALQLYAGFNIVLLYVYQLPVDFPEISNWIADFIGL
YKISTTTEWPKICSGLSLVLFYMMLSHVKCNLEEMDLILSTNESSLTEHLLPSNSFFIRE
SRSGVRHTNVLLRGSVFRTFSINFFAYGFPVSLFALSFWSFHFASICAFGLLAYVGYIVY
AFPSLFRLHRLNGLLLVFILLWAVATYVFNVAFAFFKWKLGKDTEIWEMVGLWHYPVPGF
FLLAQFCLGVLVALGNLVNNSVFLSLSDEYGQHPNDDSYGEVEDTKVLIVATVAWGLRKC
SRAIMLALIFLIAMKPGFIHAVYMIFFLVYLLGHEIGRQIRQSLILLCEAHFALLYILRI
SLISRTLEDTSSLSMQILSQLGLLDRDSSWDFLEIALLACFCAIHNHGFDMLFSFSAVVQ
HSPSTPIGFGILKAGLSKSVLLSVYASPNTRCTQRNASSERRIASFLGAIGQKFLSVYRS
CGTYIAFLTILLTVYLVTPNCISFGYILLLLCWIIGRQLVERTRRHLWFPLKFYAITVFI
FIYSLSNFSTFEMWLSGLIDLQFYLAYNSEALLLQNIWQSLAILIVMQLYSYERRQSKYI
QSDNAKLMEFGVVGFIKRLLIWHSDKIVYIAVFYASLSSISLFGFXYLLGLVICSLLPKG
SRIPSKLFLLYTGILVMTEYLFQMWGALAGMFPGQNNFSLANFLGFELFQSGFWGLELGL
RGKVLVISACTLQYNVFRWLQKVPTHILSKDYTEEPCPLFVSAEVFRDFSNSNGESKPPA
DLPAIPCEAEGVRDNLSSSASGFSQASNNVPKAGGSAAGIARKYSFGYIWGSTSESHKWN
RKRIITMRRERFETQKTIFIVYIKFWMENMFNLFGLEINMVALLLACFALLNAISMLYIA
LLAACILLNRNVIRKLWPALVFLLASILVLEYLVIWKSTLSANSQTSSKAEVHCDDCWQS
SSSHLRYCESCWLGLTIDDPCVLISYFIVFMLACLKLRADHRSSFSGSYTYREVISQRKN
IFVWRDLSFETKSMWTVLDYLRLYCYCHLLDLVLALVLITGTLEYDILHLGYLAFALVFF
RMRLTILKKRNRIFKFLRMYNFAVIVLSLAYQSPFVGDFCAKKCKTVNYIFEVIGFHKYD
YGFRITARSALVEIIIFILVSVQSYMFSSSEFDYVFRYLEAEQIGTIVSEQEKKAAWKTA
QLQHIRECEEKKRQRNTQVEKMKSEMLNLQIQLHSGIPTANCDSTSPGSEGLRRRRSSLI
SNKDAGMWDNENKLLRRQDHAVGEESVFPFEFYDSPASMNAESLPVMNSADHSFEFSHCE
ITEAEEDVEVLYMIQIRKKVRGQAKDNPIVSAVQLLGDGVSQVQSIGNQAVSSLVTFLNI
MPEDMDANEPTSQDDGKYEEMESQNMGFTDLNRSSSLQSDKSADAASFQLGRILYHIWSQ
MQSNNDIVCYCCFVLVFLWNFSLLSMAYLAALFLYALCVNTGPTYIFWVIVLIYTEVYIL
LQYLYQIIVHHHIWTADSGLLHELGFPEHKMTSFFVIGILPLFLVYLFTLIQSSITAKDG
EWTSYTEINCHRVNALCRKEVLVRDSLSKKAEELLCHMINMVKMTIRNFFWYWKSLIQGA
ESPPYFVQVSMDVGSWPDDGIQPERIESGINQLLRIVHSERYTDRNPHLCPYSSRVHVQS
IERSEEKTNIALAVFEVIYASPPTECTSAEWYRSLTPASDVAKEITFAQQSGSVEEMGFP
YIILSVIGGGKREIDLYAYIFGADLTVFFLVAIFYQSVIKNKSEFLDVSQLEDQFPKEFV
FILMIIFFMIVVDRIIYLCSCALGKVIFYLFSLILFTYSVTEHAWRLGPSQQQAGVLALR
AIYVAKAVSLSLQAIQVRYGIPHQSTLYRQFLTSRVSRVNYLGYRLYRALPFLYELRCVL
DWSCTTTSLTMYDWLKLEDIYASLYLVKCDAVLNRAKHKQGEKQTKMTKCCSGICLFFIL
ICVIWAPMLMYSSGNPTNIANPIKDASVQIDIKTIRGRLTLYQTTLCEKLPWYELNTDVD
LDPEGYLDTFDKNDIQLICCQADASELWLVPNVVQSGFSKSLEHDVDMGISFTWVLTRNR
PKGKELVKYERPVDSQDLPNRENIQKVLNGSSNGFRIHNIYPRYFRVTGSGEVRPLEQEV
NAVSADLVMNRAEQPWWSFHDINSSDVSGCGGLKGPMAIIVSEETPPQGILGDTLSKFSI
WGLYITFVLAVGRFIRLQCADLRMRIPYENLPSCDRLMEICEDIYAARAEGELGVEEVLY
WTLVKIYRSPHMLLEYTKPD
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atggggcacttcatttctggagtcttgttgcctctgctgcttttggcagctgctttaatc
aactggagtttgatatgtctggcagatttgattgcattcctcgtgtttctgtttaacgta
tcgaaattgggctttcgtcgtcagaggcctccctggttgctgtggtccatcatcatgttt
tcaatactagtaatgctctgtgaatcactatttcttatcatatgggctatccatggggga
agatggagtgaagcagatgcttcatgggctaagctttttggattcctgacagtccactcc
tggaaaaagccctcagcaatttactttttggcattacaccttttagcagttactgttgct
tttctccaaatcaactggaataggtttggtccaattatatcgccagattcatgttggggg
agctttgtgtctgttattcaacatttgggttcccgactgaggattgctttctgtttggtg
ttgcctgccatccagcttgttgtgggaatcagctacccttcatggatttctctgccattt
tttgtgggcagctgtgttggccttgtagattggtctctaagtagcaactttcttggttta
ttcaggtggtggagggcacttcagctttatgcgggcttcaacattgttctgctttatgtg
tatcagcttcccgtagacttccctgagatatcaaattggatagctgacttcattggttta
tataaaatatctactactactgagtggccaaagatttgttctggtctttcccttgttctt
ttctatatgatgctatcccatgtcaaatgtaatttagaggagatggatctcattctatca
acaaacgagagtagtttgacagagcaccttcttccttccaattcatttttcattcgtgag
tcgagatccggcgtaagacataccaatgtgctattgaggggatcagtttttcgaaccttc
agtatcaattttttcgcatatggtttcccggtctccttgtttgccctctcattttggagt
ttccattttgccagcatatgtgcctttggcttacttgcatatgttgggtacattgtttat
gcgtttccttctttgtttcgattgcatcgattaaatgggcttctgctggtcttcattctc
ctgtgggctgtggctacatatgtattcaatgtagcatttgccttcttcaaatggaagctg
ggaaaggacacggaaatctgggagatggttggtttatggcattatccagttcccggattc
tttcttcttgctcaattctgtctcggtgttttagttgccttgggaaatcttgtgaacaac
tctgttttcctcagcttatctgatgagtatgggcaacatccaaatgatgactcttatgga
gaagtagaggataccaaagtattgattgttgctactgttgcttggggactacgaaaatgt
tcaagggctattatgttggctttgatatttctcatagcaatgaaacctggcttcatccat
gctgtatatatgatattttttctggtgtatctattgggccatgagatcggcagacagata
cgacaatccctgatcctcctttgtgaggctcattttgcactgctttacattcttcggatt
agtttgatttctagaactttagaagatacatcctcattgagcatgcaaattctgtcccag
ttaggtcttctggatcgtgacagttcctgggacttccttgaaatcgctctgcttgcttgc
ttctgtgcgatccacaatcatggtttcgatatgctattttccttctcagcggttgtgcaa
cattcacctagcaccccaattggatttggcattttgaaagctggtctgagcaaatcagtt
ttgctgtccgtgtatgcttctccaaacactagatgcacccaacgaaatgcttcctctgag
agaaggattgcgtcgtttctcggtgcaattgggcagaagttcctatctgtgtatcgctca
tgtggcacatatattgcttttttgacaatccttctaacggtttacttggtgacacccaat
tgcatatcgtttggctacattttgcttctcctatgttggatcataggaagacaacttgtt
gaaaggacgagaagacacctttggtttccattaaagttttatgcaatcactgtgtttatc
ttcatatacagcttgagcaatttctccacctttgagatgtggttgtcggggttgattgat
cttcagttttacttggcctacaactcagaagctttgctgttgcagaatatttggcagtct
cttgcaatcctgattgtgatgcagctttacagctacgagaggagacagagcaagtatatc
caatctgataatgccaaacttatggaatttggagtagttggatttattaagaggctcctc
atttggcacagtgacaagatagtgtatatagcagtgttctatgcatcattgtcttcaatt
agtctctttggtttcntttatctgcttggtcttgtcatatgttcccttttacctaaggga
tctcgaatcccatcaaagttattccttctttatacaggaattctggtgatgacagaatat
ctctttcagatgtggggtgccctggcaggaatgtttcctggacagaataactttagttta
gccaatttcttgggttttgagttatttcagtcaggcttttggggtctagaattgggttta
aggggaaaagtgctggtgatatctgcttgtacccttcaatacaatgtcttccgttggtta
caaaaagtaccaactcacattttgagcaaagattacaccgaagaaccttgccctcttttt
gtatcagcagaagtgtttagggatttttctaattcaaacggggaaagcaagccacctgca
gatttgcctgcaattccttgtgaagcagaaggcgtgagagacaatttgtcttcctcagcc
tctggtttttctcaagcatcaaataatgtacccaaagctggaggctctgcggctggcatt
gctagaaaatattcatttggatatatttggggaagcaccagcgaaagccacaaatggaac
aggaaaaggattatcaccatgagaagggagagatttgaaacgcagaagacaatcttcata
gtctatataaagttttggatggagaacatgtttaatctctttggtctcgaaattaacatg
gtggccttgctccttgcctgctttgctttgttaaatgccatttctatgctctatattgca
cttcttgctgcttgcatacttctaaatcgcaatgtcattcggaaattatggccagcactt
gtctttttgcttgcttccattcttgtcctagaataccttgtcatttggaagagcacacta
tctgccaattcgcagacatcaagcaaggctgaggtacattgcgatgattgctggcaaagt
tcaagctcgcatttacgttactgtgaaagttgttggttaggtcttaccattgatgatcct
tgtgtcctgatcagttacttcatcgtcttcatgcttgcttgtttaaaacttcgtgccgat
cacaggtccagcttttcagggtcatatacttacagagaagtgatatctcagcgcaaaaac
atatttgtatggagagacctctcatttgaaactaaaagcatgtggacagttcttgactac
ctgaggctatattgttattgccatctgttggatctcgtgcttgctttagttttaattact
gggaccctggagtacgatatattgcatcttggatatcttgcctttgctctggttttcttt
cgaatgagactcactatattgaagaagagaaataggatttttaagttcttgcggatgtac
aactttgcagttattgttctatctcttgcatatcaatctccttttgttggggatttttgt
gccaaaaaatgcaagacagtaaattatatatttgaggtgattggttttcacaagtatgat
tatggtttccgcatcaccgcaagatctgcactggttgagatcatcatcttcattctcgtg
tcagtgcaatcctatatgttttcttcctcagaattcgactatgtcttccgatatcttgag
gcagagcaaattggtaccattgtaagtgaacaagagaagaaagctgcatggaagactgct
cagttacagcacattcgtgaatgtgaggaaaagaaacgtcagaggaacacacaagtggag
aaaatgaaatctgagatgctcaacctgcaaattcaacttcatagtggaatccccactgca
aactgtgacagcacttctccaggtagcgaagggcttcggaggagaaggagctctttaatt
tcaaataaagatgctgggatgtgggataatgagaataaattgctgagaagacaagatcat
gctgttggcgaggagtctgtatttcctttcgaattttatgattctcctgccagtatgaat
gctgaaagtcttcctgtgatgaattcagctgatcattcatttgagttttctcattgtgag
atcactgaggctgaggaggatgtggaggttctttatatgattcagataagaaagaaagtc
agaggtcaagctaaggataaccctatagtttctgctgtacagcttttaggagatggtgtt
tcccaggtccaatctatcggaaaccaggcggttagttctcttgtaaccttcttgaacatc
atgccagaagatatggatgccaatgaacccacatcacaagatgatgggaagtatgaagag
atggaaagccagaacatgggatttacagatttgaatcgttcttcatctctgcaatctgat
aagagtgctgatgctgcaagtttccaactagggaggatattatatcatatatggtcccag
atgcagtccaataatgacattgtgtgttactgttgcttcgttctggtcttcctgtggaac
ttcagcctgctgtcaatggcatatcttgctgcactctttttgtatgccctttgtgtaaat
actggtcctacttatattttctgggttattgtgttgatctacacggaagtttatattcta
cttcaatatctttaccaaattattgtccaccaccatatatggactgctgattcgggcctc
cttcatgagttgggatttcctgaacataaaatgacatctttctttgttattgggatactg
ccgctatttctagtctacctatttaccctcatacagagctcaataactgcaaaggatggt
gaatggacgtcatacactgagataaattgccatagggtgaatgctctgtgcagaaaagag
gtccttgtcagggatagcttgagcaagaaggctgaagagctgctgtgccacatgataaac
atggttaaaatgacgatcagaaacttcttttggtactggaagtcactgatacagggggca
gaatctccaccttactttgttcaggtgtccatggatgttggttcatggcctgatgatggg
attcagccagagagaatagaatctggaatcaaccaattgctgagaatagttcacagtgag
agatacacggatagaaatcctcatctttgcccatattctagtagggttcatgttcaaagc
attgaaagaagcgaagaaaagacgaatatagctttggcagtttttgaggtgatatatgcc
tcacctccaacagagtgtacttctgcagaatggtacaggtcattgactcctgcaagtgat
gtagcaaaagagattacttttgcacagcaatctggatctgttgaagaaatgggatttcct
tatatcatactttctgtaataggaggtggcaaaagagaaattgatctgtatgcctatatt
tttggtgcagatttgactgttttctttttggtggctattttctatcaatctgttataaag
aacaaaagtgagtttcttgatgtatctcagctcgaggatcaatttccgaaggaatttgtc
tttatactaatgataatcttcttcatgatcgtggttgaccgcataatttacctatgttca
tgtgcgctggggaaagtgattttttatctttttagtctcattcttttcacatactcagta
actgagcatgcctggcgcttggggccttcccagcaacaagctggagttttagctcttcgt
gctatatatgtagcaaaagctgtttctttgtcattacaagccatacaagtacgctatggc
attcctcatcaaagcaccttgtatcgacagtttttgaccagtcgcgtctctcgggtcaat
tacttaggctataggttgtatcgagctttgccattcctttatgagttacggtgcgtgctg
gactggtcatgcacaaccacatccttgactatgtacgactggctaaagttggaagacatt
tatgcgagcctatacctggtcaagtgtgatgcagtcttaaatagagccaagcacaaacaa
ggagagaagcagaccaaaatgaccaaatgttgcagtggcatctgtctatttttcatattg
atatgtgttatctgggccccaatgctgatgtacagcagtggtaacccgactaatattgca
aatcccatcaaagatgccagcgttcagattgatatcaagaccatccgtggaaggttaact
ttgtatcaaaccactttatgtgagaagctcccatggtacgagctcaacactgatgttgat
ctagatcctgaaggttacttggatacttttgataagaatgatatccaattgatatgctgc
caagctgatgcaagcgagttgtggcttgtccccaatgtggttcagtctggattttctaag
tcccttgaacatgatgtggacatgggcatatcgtttacctgggtacttacgaggaaccga
cccaaaggaaaggaacttgtgaagtatgagaggcctgtcgattctcaggatcttccaaat
agagaaaatatccaaaaggtcctcaatggctccagcaacggctttaggatacataatatc
tatcccaggtacttccgtgtcacaggttccggtgaagtcagacctcttgaacaggaggtt
aatgcagttagtgcagaccttgtcatgaatcgtgcagaacagccgtggtggtccttccat
gatataaattcatcagacgtcagtggatgtggaggattgaagggaccaatggcaattata
gtgtctgaagaaacacccccccagggcatccttggtgacacgcttagcaagttcagcatc
tggggcctctatattacttttgtgctggctgtcggtcgctttatcagactccagtgtgct
gacttgagaatgagaataccctatgaaaatcttccttcctgcgacaggttgatggaaatt
tgcgaggatatatatgctgcaagagcagaaggtgaacttggagtggaggaggtcctttat
tggacactagttaagatttaccggtccccacacatgcttcttgagtataccaaacctgac
tag
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integrated database retrieval system
