Eucalyptus grandis (rose gum): 108955995
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Entry
108955995 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP93A-like
KO
K14309
nuclear pore complex protein Nup93
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108955995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
108955995
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108955995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_1
TPR_8
TPR_2
Motif
Other DBs
NCBI-GeneID:
108955995
NCBI-ProteinID:
XP_039161673
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Position
11:22134494..22141210
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AA seq
710 aa
AA seq
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MSQRNLDQLEALSKKLKSKTLRTEAPSQSIAATRLLAREGINAEQLARDLKSFELKTTFE
DVFPAEATTVEDYLQQVHEIAMVSAIQEAQKDNVRSFNDYMLKVLEDDWQKEKRDFLQSL
SRISLLPKTNIVDSGYGGTRLPQIASTVSSPQVSSGPSGMEIVAVANKSILEKKASVYGG
VVKDLNSAREHGLPFKPATAFKGAYESLAINTSGGKSVSMQKIWHLIQALMDEDSVVRWN
VSKKMSLVIGARRHLEWGHEKYIMDMIQSHPAQAALGGGVGNLQRIRAFLRIRLRDYGVL
DFDVGDARRQPPVDTTWQQIYFCLRTGYYNEARDVALSSRSAHQFAPLLTEWINTGGMVS
AETAATASEECEKLLRMGDRVGRAAYDKKRLLLYAMISGSRRLVERLLRDLSALFTTIED
FLWFKLSAIREFPLGGSSAILSESSVPYSLEDLQAYLNKFAASCYTKNGKDPLVYPYILL
LSVQFLPAILYLSKEAGDEGYNIDATHIAIVLADHGVLKEGTGAGSKFGVMDAYAEASSM
IQQYGSSYLYLGDLSMALEYYAQAAAAVGGGRLSWTGRANADQQRQRSLMLKQLLMELLL
RDGGIYFYLVXKRFREEGELTRFIPDVKTRQQFLLEAARQCLEAGIYDKSIEILKRIGAF
SMALDTINKCLSDSICALSRGRLDGESQTAGLVHSGNEILETYKYSPEIR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaggaaccttgatcagttggaagcattatccaagaagctcaagtcaaagact
ctaaggactgaagctccatctcaatctattgcagccaccaggcttcttgcacgtgaaggg
ataaatgccgaacagcttgcacgagatctgaagtcctttgagctgaagactacattcgag
gacgtgttccctgctgaggcgacaactgttgaggattatttgcagcaggttcatgaaata
gcaatggtctcagctattcaggaagcacagaaggacaatgttagaagttttaatgattat
atgctgaaagtattggaggatgattggcaaaaggaaaagcgtgactttcttcagagctta
agccggatatcattattacccaagactaacattgttgattcaggctatggaggcactcgt
ctcccccaaatagcctcaacagtttcaagtcctcaagtttcatctggtccttcaggcatg
gagattgtagctgtagcaaacaagtcgattcttgagaaaaaagcttctgtctatggtggt
gttgtgaaggaccttaacagtgccagagagcatggcttgccatttaaacctgctactgct
ttcaagggtgcttatgaaagtttggctattaatacgtctgggggaaaatcagtcagtatg
cagaaaatatggcatctcattcaggcgcttatggatgaggattcagttgttcggtggaat
gtttcaaagaagatgtcattggtaattggtgcaaggcggcaccttgagtgggggcatgag
aagtacattatggacatgatacaaagtcatcctgcacaagctgctcttggtggtggtgtt
gggaatttgcaaaggattcgtgccttccttcggattcgtttgcgtgattatggtgttctc
gacttcgatgttggtgatgctcgaaggcagccacctgttgacaccacgtggcagcagata
tacttttgcctgagaactgggtattacaatgaagcaagagatgttgccttgtcatcccgt
agtgcacatcagtttgcacctctgctcacagaatggataaatactggaggtatggtttct
gctgagacagctgcaactgcttcagaagaatgtgaaaagttgttaagaatgggtgatcgg
gtgggtcgagctgcatatgataagaaaaggttgttactatatgccatgatatctggttct
cgaaggcttgttgaaaggctgctgagagatctatcggcacttttcaccaccatagaggat
ttcttgtggtttaaattgtcagccatcagggagttccctctcggaggttcatctgctatt
ctaagtgagagttcagtcccctatagtttagaggatttgcaggcttacctaaataagttt
gcagcatcatgctataccaaaaatgggaaggaccctcttgtgtatccatatattctgctc
ctaagcgtccagtttctcccagctatcctctatttgtctaaagaagcaggcgatgaaggg
tacaacattgatgccactcacatagctatcgtgcttgctgaccatggtgtccttaaggaa
ggtacaggggcaggatcaaagtttggtgtaatggatgcttatgcagaagcatctagcatg
attcaacagtacggatcttcatatttatatcttggagatctttcaatggcattggaatat
tatgcacaggctgctgctgcagtgggtggtggacgactatcttggactggaagggcaaat
gcggatcagcagagacagagaagtttgatgctgaaacaactcctcatggagctgttattg
cgagatggtgggatttacttttacttggttnncaagaggttcagggaagaaggtgaattg
acaaggtttataccggatgtaaaaacaagacaacaatttctgcttgaagctgctcggcag
tgcttggaagctgggatatatgacaaatcaatagagattctgaagagaattggggcgttc
tcaatggccctggacaccattaataaatgcctttcagactcaatatgtgctctttcacgt
ggacggttggatggtgagagccagacagctggcttggttcattctggaaatgagattttg
gagacctacaaatatagtcctgaaatcaggtaa
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