Eucalyptus grandis (rose gum): 120285849
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Entry
120285849 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: protein SPA1-RELATED 3-like
KO
K26557
protein SPA1-related 3/4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120285849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
120285849
Ubiquitin system [BR:
egr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
120285849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Pkinase
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_like
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-GeneID:
120285849
NCBI-ProteinID:
XP_039171602
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Position
6:complement(44047638..44055917)
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AA seq
911 aa
AA seq
DB search
MCVLWASCSFGWITMEGSSDSAWHRSDSSRGLSTSNVSGRNLRLLRGERIDFSGDAQQDF
AFRKVRDRVLSASADSLRNQAGLSREFEEELTVNPFFRALEWDDVSLRQWLDKPDRQVDE
FECLHIFRQIVDIVNVAHSQGVVIQNVRPSCFVMSSFNRVSFIESASCSDSGSDSLEDGS
NSRTEAKDESSSFPHDMHRQKRSENSHYAETPTTIALFGDSCIQSSSIYAAKVSLVEEIG
DNKIKDGSTAEXSKENAPPFPMKQVLLMEASWYTSPEEVAGAPSCCASDIYRLGILLFEL
FCPFSSSEEKCSTMSSLRHRLLPPQLLLKWPKEASFCLWLLHPEPKSRPMMSELLQSQFL
NEPRDNLEEREAAMELREKIEEQELLLEFLLLMQQKKQEVADKLQATLSLLCNDIEEVTK
QKMVLKNGANSCPELGKEDQTASSLPSHDIVDNDETTSPGSRKRGRPGLLVHNGEECCYD
PDDNQKSDAHVDKRDSFLLKSSRLMKNFSKLESAYFLTRYRQLKQSTRPLMKPSPLSSDG
KGSVVMTERSSINTAASRERYSEDRKSGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNS
SNLVCSLGFDRDGDFFATAGVNKKIKVFECDAILMEDRDIHYPVVEMAGRSKFSSICWNT
YIKSQIASSNFEGVVQVWDVTRSQVLREMREHEKRVWSIDFSSADPTLLASGSDDGSVKL
WSINQGVSIGTIKTKANVCSVQFPSDSGHSLAFGSADHKIYYYDLRNSRAPLCTLAGHNK
TVSYVKFLDSVNLVSASTDNNLKLWDLSVCTSRSNEPPLQSFTGHTNVKNFVGLSVSDGY
IATGSETNEVFIYHKAFPMPALSFKFSGTDVLSGPEMDDAAQFISSVCWRGQSSTLVAAN
STGNIKILEMV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttttgtgggcttcatgcagctttgggtggataaccatggaaggttcatctgat
tctgcttggcacaggtctgatagttctaggggattaagtacatcgaatgtctcgggcagg
aatctgaggttgcttcgtggcgagagaatcgatttttcgggtgatgcacagcaggatttt
gcttttagaaaggtaagagatcgagttctttctgcttctgccgatagccttagaaatcaa
gccggattatctcgtgaattcgaggaggagctaacggttaaccctttcttccgtgcccta
gagtgggatgatgttagcttgagacagtggttggacaaaccagatagacaagtggatgaa
ttcgaatgtttgcatatatttaggcaaatagtggatatagtgaatgtcgcccattcacaa
ggagttgtcatccaaaatgtgcggccttcttgctttgttatgtcttctttcaaccgggtc
tccttcatagaatccgcctcttgttcagattcaggatctgattctttggaagatgggtca
aatagccggactgaggccaaagatgaatcctcttcctttccccatgacatgcatcggcag
aaaagaagtgagaattctcattatgcggaaactcctactaccattgcgctattcggtgat
agttgtatccagtcaagctccatttatgcggccaaagtttcattagtggaagagattggg
gacaataagattaaagatggaagcaccgctgaancaagcaaagagaatgccccacctttt
cccatgaaacaggtgttgctcatggaagcaagttggtatactagccctgaggaggttgct
ggggcccctagttgctgtgcgtcagatatataccggttgggcatcctccttttcgagtta
ttttgtccattcagttccagtgaagagaaatgcagcacgatgtcaagtctgagacatcgg
cttcttcctcctcagctgctgctaaaatggccaaaagaggcttcgttttgcttatggcta
ctccatccagagcccaaaagtcgaccaatgatgagcgaattgttgcagagtcagtttctt
aatgagccgagagataacctggaggaacgtgaagccgcaatggagctcagagagaaaata
gaggaacaggaattgttgctggagtttctcttgctgatgcagcaaaaaaaacaagaagtg
gctgataagttgcaagctactttatctcttctttgtaacgatattgaagaagtaacaaaa
cagaagatggttctgaagaatggagcaaactcatgcccagaactgggtaaggaagatcag
acagcttcaagtcttccttcacatgacattgttgataatgatgaaactactagcccggga
tctagaaagcgaggcagaccaggactgctggttcataatggggaagaatgctgctatgat
cctgatgataatcagaaatcagatgctcatgttgataaacgagatagttttcttttgaaa
agctctcgattgatgaagaacttcagcaaattggagtcggcatacttcttgactagatat
cgacagctcaagcaatctacgaggccactgatgaagccttcacctctcagcagtgatggt
aaaggttctgttgtaatgaccgaaaggagttctatcaatacagccgcatcaagagagcga
tacagtgaagatagaaagagtgggtggataagtcctttcctcgaaggactttgcaagtat
ctatctttcagtaagttgaaagtgaaggcagacttgaaacaaggggatcttctcaactca
tccaacttagtgtgctccctcggttttgatcgagatggggacttttttgccacagctggt
gtaaataaaaaaattaaggtgtttgagtgtgatgctatcttaatggaagatcgtgatatc
cactatcctgtggttgaaatggccggtaggtcgaaattcagtagtatatgctggaataca
tatattaaaagccagattgcttcgagtaacttcgaaggtgtggtgcaggtctgggatgtt
acaagaagtcaggtcctcagggaaatgagagagcatgaaaaacgagtttggtccattgac
ttttcatctgcagatccaacattgttggctagcggcagtgatgacggctctgtcaaactt
tggagtatcaatcagggtgtgagtatcggtaccatcaaaaccaaggcaaatgtatgtagt
gttcagtttccttcagattctggccattctcttgcatttggttcagcagatcataagatt
tattactatgatctccgtaattcaagagctcctttgtgcacattagctggacataacaag
accgtcagttatgtcaagtttctggattcagtgaatcttgtatctgcatccacggataac
aacttgaagctttgggatttgtcagtgtgcacatctcgaagtaatgagcctccccttcaa
tcatttacaggtcacacaaatgtgaagaactttgttggcttgtcagtttctgatggctac
atagcaaccggttctgaaacaaatgaggtcttcatctaccacaaggctttccctatgcct
gcactatcattcaaattcagtgggacagatgtactttctggccctgaaatggatgatgcg
gcacagttcatttcttcagtttgttggcgcggccagtcctcaaccttggtcgctgcaaat
tccacaggaaatataaagattttggaaatggtctaa
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