Eucalyptus grandis (rose gum): 120288729
Help
Entry
120288729 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin-conjugating enzyme E2 23
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120288729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
egr04121
]
120288729
Enzymes [BR:
egr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
120288729
Ubiquitin system [BR:
egr04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
120288729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-C_UBE2O
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
120288729
NCBI-ProteinID:
XP_039158786
LinkDB
All DBs
Position
10:17298303..17305775
Genome browser
AA seq
1134 aa
AA seq
DB search
MALQQKNIAAEEPTISGHDTTLEEADSAISGGLSDVNNNGDGDGMAEAVRDIKETQSFPG
IYRQDVVRSKKNGTIGIVTEVAGDSDSDGSITDEEDEDEDDEDDAEDSANEETDGDRIKM
SQENCARSQGGDKPGPLSADQVRVLYMNDIESTQSFGEVTVIDRDSYGDYVASATDPTGQ
IGVVVDVSINVDVLNSSGSIIEDIPSKELKRVTEFSIGDYAVLGPWLGRVDGVLDNVTVQ
FDDGSVKVMKAEPHRLKPITKNLLEDEHCTYFPGQRVKASSSSIFKNSRWLYGLWRANKL
EGTVTKVTIGSVFIYWIASAGHGPDSSTAPAEEQXPKKLKLLSCFSHANWQLGDWCLLPS
STPASSNLLYTGLSKLELDDSLNNELESSQPEKEVALEESIDHGEFINTDADTVLDPKAP
LESVTRCTASSESSSCSSSLSVAKETLHEPWPLHRXKIRKVVLKRDKKIRRKEENFEKAL
QIVNTRTKVDVVWQDGQIERCLDSTKLIPIETPGDHEFVAEQYVIEXTDDDDYVGEVRRV
GVVKSVNAKERNSSCQLVKTSCQARRSREFEKEEVVSVYELEGHPDYDYCYGDVVVRLSP
VSASLQMDSGMKSMETGTQQSMPEDYTTDNEEDSSGTQNVEEVTDNEAASTFTDLSWVGN
ITGLEDGNIEVTWADGMVSTVGPQAIYVVGRDDDDGSIASGSGVSDAASWETVDDDEMDA
VENDKEEVGLANDDADNDSGEESVENHAGMNSALSIGDWNIFTRPEKSGLWFGFGRENES
HSQMLMKSSEKLYSSDECSSEKSNIMDCTGTDMTYPSGDQDISGVAPDPVGAAESLCYTR
SQEVDAPASYEETACTFKRFDTARDPIDHYFIGTNGQVNGGRKWFKKVQQDWNILQNNLP
DGIYVRVYEDRMDLVRAVIVGAYATPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINP
NLYEEGKVCLSLLNTWTGRGNEVWDSSSSSILQVLVSLQGLVLNSKPYFNEAGYDKQIGT
AEGEXNSLAYNENTFLLNCKTMLNLMRKPPKDFEDLVKEHFQKRGYYILKACDAYMKGYL
IGSLAKDASVSSENNANSTSVGFKLMLAKIVPKLLLALDEAGADCHEFRHLGEP
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcaacagaagaatattgctgctgaggaaccaaccataagtgggcatgacacg
actttggaggaagctgattctgctattagtggtggtctttctgatgtgaataacaatggt
gatggtgatggaatggcagaagcagttagagacatcaaggaaactcagagtttccctggc
atatacagacaagatgtggtgaggagcaagaaaaatggaacgatcggtatagtgactgaa
gttgctggggactctgattcagatggcagtattactgatgaggaagatgaagatgaagac
gatgaagatgatgctgaagacagtgcgaacgaggagactgatggtgatagaatcaaaatg
tctcaggagaattgtgccagaagccaaggtggtgataaaccaggtcctctatctgccgac
caagttcgagtgctttatatgaatgacattgagagtactcaaagttttggtgaagtaaca
gtcattgatcgggattcttatggggattatgtggcttcagccacagaccctacaggtcaa
attggtgtcgtggtggatgttagtataaatgtggatgttttaaattctagtggatctatt
atagaagatatcccatccaaagaactaaagcgcgtgacagaattttctattggagattat
gctgtcctcggtccatggctgggtagagtggatggtgttctagataatgtgactgtgcag
tttgatgatggttctgtcaaagtaatgaaggctgagccacatcgcctcaaacctattacc
aagaatctgctggaagatgaacattgtacttattttcctggtcaacgtgtcaaggctagc
tcttcttcgattttcaagaattcgagatggctatatgggttgtggagagctaataagttg
gagggtactgtgaccaaagtcaccataggctcagtgtttatatattggatagcttctgct
ggacatgggcctgattcttctactgctccagcagaagaacagnagccgaagaaactgaaa
ttactgtcttgcttttcccatgcaaattggcagctaggtgactggtgccttcttccatct
tcaacaccagcttcgtctaatttattatacacaggtttgtcaaaactagaacttgatgat
tcgctcaacaatgagttagagagctctcaaccagaaaaggaggttgcattggaggagtca
attgatcatggagagttcattaatactgatgcagacactgtattggacccaaaggctcca
ctggaatcagttacacggtgcacagcttcatctgagtctagctcatgtagtagttcattg
tcagttgccaaggaaactcttcatgaaccttggcctcttcatcggnaaaagattcgtaaa
gttgttctgaagagggacaagaagattcgaaggaaagaggagaattttgaaaaggctctt
caaattgtcaataccagaacaaaagttgatgtggtgtggcaggatggtcagattgaacgc
tgtctggactcaacgaaattgattccaattgagacacctggtgatcatgaatttgttgct
gaacagtacgtgatcgaannaactgatgatgacgattatgttggtgaagttcggcgtgtt
ggggtagtgaaaagtgtaaatgccaaagagcggaacagctcgtgtcaactggttaaaacc
agttgccaggccagaagatcccgtgagtttgagaaagaggaagttgttagtgtctatgag
ctggagggacatccagattatgactattgttatggtgatgttgttgtacgtttgtctcct
gtttctgcttctctgcaaatggattctggtatgaaatctatggagacaggaacacaacaa
agcatgccagaggattatacaacagataatgaagaagacagctcagggactcaaaatgtt
gaggaagtcactgacaatgaagctgcctctacctttacagatctttcatgggttggtaat
ataactgggcttgaagatggtaacattgaagttacatgggctgacgggatggtttcaacg
gttggaccacaggccatatatgttgtcggtcgagatgatgacgatgggtcaattgcttct
ggcagcggggttagtgatgctgcaagttgggaaactgtagatgatgatgaaatggacgct
gtagagaatgacaaagaggaggttggacttgcaaatgatgatgctgacaatgattctgga
gaagagagtgtcgaaaaccatgctggaatgaattcagcactttctattggcgactggaat
attttcacgaggccggaaaaatctggactctggtttggattcggaagggaaaatgaaagt
cattcccagatgttgatgaaaagttccgagaaattatattctagtgacgagtgtagctcg
gagaaatctaatatcatggactgtacgggtacagacatgacttatcctagtggggatcaa
gatatttctggggtagctcctgatccagtgggtgcagctgaaagtctatgctatacgagg
tctcaggaagtagatgctccagcctcctatgaagaaactgcttgcacttttaaacgtttt
gatacagctagagatcctatagatcactatttcattggcacgaatggacaggtcaatggt
ggaagaaagtggttcaagaaggtacagcaagactggaatatccttcagaataacctccct
gatgggatttacgtacgagtctatgaagaccgaatggatcttgtgagggcagtaattgtc
ggggcatatgcaacaccctaccaagatggtctttttttctttgactttcaccttccccca
gagtatcccgatgttccaccatcagcatattatcattctggcggatggcgaattaatcct
aacttgtatgaggaggggaaagtctgccttagcctcttgaacacctggactggcagaggg
aatgaagtgtgggattcatcatcttctagcattcttcaagtgttggtttcactccaagga
ttggtgctcaattccaaaccatacttcaatgaggcagggtatgataagcaaattgggaca
gctgaaggagagnaaaactcattggcctataatgagaacactttcttgttgaattgtaag
acaatgctgaatctaatgcgaaagccccccaaggacttcgaagaccttgtcaaggagcat
tttcagaagcgtggttattacatcctcaaggcatgtgacgcatatatgaagggatattta
atcggatctctcgctaaagacgcctctgtaagcagtgaaaacaatgcaaattcaacttca
gttggcttcaaacttatgttagccaagatcgtaccaaagcttctcttggcattggatgaa
gctggagctgattgccatgaattcagacatttgggagaaccatag
DBGET
integrated database retrieval system
