Eucalyptus grandis (rose gum): 120290429
Help
Entry
120290429 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome A-like
KO
K12120
phytochrome A
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120290429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
120290429
NCBI-ProteinID:
XP_039162613
LinkDB
All DBs
Position
2:27474691..27479457
Genome browser
AA seq
1130 aa
AA seq
DB search
MSSSRPSQSSSNSARSRHSSRIIAQTTVDAKLHADFEESGSSFDYSSSVRVTGTPSGDQQ
PRSDKVTTAYLHQIQKGKTIQPFGCLIALDEKTFKVIAYSENAPEMLTMVSHAVPSVGDQ
PVLRIGTDVRTIFTAPSASALHKVFGFADVSLLNPILVHCKTSGKPFYGIVHRVTGSIII
DFEPVKPYEVPMTAAGALQSYKLAAKAIARLQSLPSGSIERLCDTMVQEVFELTGYDRAM
AYKFHDDDHGEVVSEITKPGLEPYLGLHYPATDIPQAARFLFMKNKVRLIVDCRAKHVNV
LQDENLPFDLTLCGSTLRAPHTCHMQYMENMDSIASLVMAIVINEDNEEGDGPNSVQPQK
RKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVSKELELENQMIEKNILRTQTLLC
DMLMRDAPLGIVSQTPNVMDLVKCDGAALLYKSKTYKLGVTPNDAQLHGIASWLSEYHMD
STGLSTDSLYDAGXPGALAVGDIVCGMAAVRISAKDVIFWFRSPTASEIRWGGAKHDPDE
KDDGRKMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNAFKENEAIDMNTSTIH
TRLNDLKIEGIQELEAVTSEMVRLIETATVPILAVNADGLVNGWNTKIAELTGLSVEKAL
GKHFLTLVEDSSVDIVKKMLHMALHGKEEKNIQFEIKTHDSRADSGPISLIANACASRDI
QENVVGVCFVAQDITGQKMVMDKFTRIEGDYKAIVQNPNPLIPPIFGTDEFGWCSEWNPA
MAKLTGWKREEIIDKMLLGEXFGMHMACCRLKNQEAFVNLGVVLNGAMTGKELEKVQFGF
FARGGKFVDCLLCVSKKLDGEGSVTGIFCFLQLASPELQQALHLQRLTEQTALKRLKQLA
YMKRQIRNPLSGIIFXRKLLEETELGLEQKLLLHTSAQCQSQLGKILDDSDLDSITDGYM
ELEMVEFTLHKVLVASMSQVMIKSNGKGVRIVNDVTEEAMTETLYGDALRLQQVLADFLS
VSINYTPTGSQLVIAAHLTKDHLGESVQLAHLELRLTYAGGGISEALLNQMFENDGEISE
EGISLLISRKLVKLMNGDVQYLREAGKSTFIISVELAVANKSGSSLKGKN
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcaagacccagccagtcatccagcaactcagcaaggtcgaggcatagctcg
aggataatagctcaaaccactgtagatgctaagctgcatgctgattttgaggagtctggt
agttcctttgactattcaagctcagtacgagtgactggcaccccgagtggagatcagcaa
ccaagatctgacaaagtaacaacggcttacctccatcagatacagaaagggaagactatc
cagccatttggttgccttattgcattggacgagaaaactttcaaggtcattgcatacagt
gagaatgcacctgaaatgctgaccatggttagccacgcagttccaagcgttggggaccag
ccagtcctcaggatcgggactgacgtaaggaccatatttactgcaccaagcgcatctgct
cttcataaggtctttggatttgcggatgtttctctgttgaatcccatcttagtccattgt
aaaacttctggaaagcccttctatggaattgtccatagagtgaccggaagcataatcatc
gatttcgaacctgtgaagccttatgaagtccctatgacagctgctggagctttgcagtca
tataagcttgcagctaaagccattgcgcgcttgcagtctttgcccagtgggagtatagag
aggctttgtgacacaatggttcaggaagtctttgaactaacgggttatgacagggctatg
gcatataagttccatgatgatgaccacggtgaagtagtctcagagataacaaagccaggc
ctggagccatacctgggtctgcattatcctgccacggatattcctcaagccgcacggttt
ctgttcatgaagaataaggtccgcttgattgttgattgccgggcaaaacacgtgaacgtg
cttcaggatgagaatctgccctttgatctcaccttgtgtggttcaaccctgagggcccca
cacacttgtcatatgcagtacatggaaaacatggactccatcgcttctctggttatggcg
attgtcatcaatgaggataatgaagaaggcgacggccccaactctgtgcagcctcaaaaa
agaaagagactttggggtctagtggtttgccataacacgactccaaggtttgttccgttc
cctcttcggtatgcctgtgagtttcttgcccaggtgtttgccatccatgtcagcaaggag
cttgagttagaaaatcaaatgattgagaaaaatatcttgcgtacgcagacgctcttgtgc
gatatgctgatgcgtgatgcacctctaggcattgtgtctcagaccccaaatgtgatggac
cttgttaaatgtgatggtgctgcccttctgtataaaagcaagacatataagctgggagta
actccgaatgatgcacaattgcatggcattgcatcgtggttgtccgagtaccatatggat
tccacgggattgagtacagatagcttgtatgatgcggganttccgggggctcttgctgtt
ggtgacattgtttgtgggatggctgctgtgagaataagtgcaaaggatgtgattttctgg
ttccgctcaccaactgcctcggaaattcgttggggtggagcgaaacatgatcctgatgag
aaggatgatggtaggaaaatgcatccaaggtcatccttcaaggcttttcttgaagttgtc
aagacaaggagtttaccttggaaagactttgaaatggatgcaatccactcgctgcagctt
atcttgaggaatgccttcaaagaaaatgaagcaattgacatgaacacctcaaccatccat
acgaggcttaatgaccttaaaattgaggggattcaagaattggaagcagtgacgagtgag
atggtccgtctgattgaaacagccacggtaccgatcctggctgtcaatgctgatgggctg
gttaatggttggaatacaaaaattgctgagctaactggtctgtctgttgagaaggcatta
gggaagcatttcctcacactggtggaggattcttctgtcgatatagtgaagaaaatgtta
catatggcattacatggcaaggaagagaagaatatccagtttgagattaaaacacatgat
tctagagctgactctggcccaatcagcttaattgcgaatgcctgtgctagcagggacatt
caagaaaatgttgtgggtgtgtgtttcgtcgctcaggacattactggtcagaaaatggtc
atggacaagttcactagaattgagggtgactacaaagcgattgtgcaaaatccgaacccc
ttgatacccccgattttcggaacagatgaatttggctggtgctccgagtggaatccagct
atggcaaaactcactgggtggaaacgggaagaaataatagataaaatgctacttggggag
ngttttgggatgcacatggcatgctgtcgtctcaagaatcaagaagcttttgttaatctt
ggagtagtgcttaatggtgctatgactggcaaagagctggagaaagttcagtttggtttc
tttgctcggggtgggaagtttgtggactgcctactatgcgtgagtaagaaacttgacgga
gagggttcggtgaccggaattttttgcttcttgcagctcgcgagcccagagctgcagcag
gcacttcatctccaacggctaactgaacaaactgccttgaaaaggttaaaacaattagct
tacatgaaaaggcagattcgaaaccctctatccgggataatatttnntcgcaaattgctg
gaggaaactgagttaggacttgaacagaagctgttgctacataccagtgctcaatgccaa
agccagctgggcaagatccttgatgactcagatctggatagcatcactgacggatacatg
gagttagaaatggtcgagtttactctccataaagtcttggtggcttccatgagtcaagtc
atgataaaaagcaatggaaagggtgtacgaattgtcaatgatgtgacggaagaagccatg
accgaaactttgtacggggatgctctcaggcttcaacaggtcttagcagatttcttgtcg
gtatcaattaactacaccccaacaggaagccaactcgttattgcagctcatttgaccaaa
gatcacttaggagaatctgttcaacttgcacacctggaactaagattgacctatgctggt
ggtgggatatcggaagcgttgttgaaccagatgtttgaaaatgatggagagatatctgag
gaaggcatcagcctgcttatcagcagaaagttggtgaagctaatgaatggagatgtgcag
tacctgagggaagctggaaaatccaccttcatcatatctgttgaactcgctgtagctaat
aagtctgggtctagtttgaagggaaaaaattaa
DBGET
integrated database retrieval system
