Eucalyptus grandis (rose gum): 120290501
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Entry
120290501 CDS
T03547
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr00040
Pentose and glucuronate interconversions
egr01100
Metabolic pathways
Module
egr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120290501
Enzymes [BR:
egr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120290501
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120290501
NCBI-ProteinID:
XP_039162710
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Position
2:11994172..11996668
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AA seq
475 aa
AA seq
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MAMKSYVGALLLLLSFSSSINAQVFNVASYGAKGDGSSDISQALLSAWKEACASTTPAKV
LIPGGTFALTEVALDGPCKAPVEFELQGTLKAPADPSLFKNDGWVTFQRIDGLTVSGGGT
FDGQGKTAWGQNDCAKNTNCRTLPTNLRFNFVTNAIIHDVTTLDSKYFHVSILGAKNMTF
QNFHVNAPAESINTDGIHIGRSLGVNILDSDIKTGDDCVSLGDGSRQITVKGVSCGPGHG
ISVGSLGKYENEEPVEGVFVTNCTINGADNGVRIKTWPASKPGTASDMHFEDIQMNNVTN
PVLVDQGYCPFNQCQAQIPSLVKLSKVSFKRIRGTSASQVAVKVACSQRVPCDEVEIADI
DLVYNGPEGPATSECSNVKPLISGKLNPTACAKPHIPKKVKISDVSFRDIRGTSATPLLL
RSLAAEEECLARKWSFADINLRYNGRNGAATSQCANVKPTITGKSSPPLCAGLRS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaaatcgtacgttggtgcactgctgctgctgttgtctttttcttcttccatc
aacgcccaggtctttaacgtcgcgagttacggtgcaaagggcgatggcagttcagacatt
agccaggcgttgctgagtgcatggaaagaggcgtgcgcatccaccactcctgctaaagtg
ctgatcccggggggaacgtttgcgctgacggaggttgccctggacggcccctgcaaggcc
cctgtggagtttgagctccaaggcacattgaaggccccggcggacccgagcctcttcaag
aacgacggttgggtcacgttccaacgcattgacggcctcaccgtgtcgggcggcgggacc
tttgacggccagggcaagacagcctgggggcagaacgactgcgccaagaacacgaactgc
cgtactctccccaccaatttgaggttcaacttcgtcaccaatgccataatccatgacgta
acgacgctcgacagcaagtatttccacgtaagcatcttgggcgccaagaacatgacgttc
caaaatttccacgtgaatgcgccggccgagagcatcaacacggacgggatccacattgga
cggtcgctcggggtcaacatcctcgacagcgacatcaagacaggggacgactgcgtctcc
cttggtgacgggagccggcagatcactgtcaagggggtgagctgcggtccgggccacggc
atcagcgtcggcagcctcgggaagtatgaaaacgaagagcccgtggagggtgtcttcgtc
acgaactgcaccatcaacggtgcggataacggtgtgaggatcaagacttggcctgcgtcg
aaacccggcacggcttctgacatgcatttcgaggatatccagatgaacaatgtcaccaac
cctgtgctcgtagaccagggatactgcccattcaaccagtgccaagcacagattccttcg
cttgtcaagctcagcaaggtcagcttcaagagaatcaggggaacctcagcatcccaggtc
gcggtgaaggtcgcctgcagccagcgcgtgccgtgcgacgaagtcgagattgcggacatc
gacctcgtgtataatggccccgaaggccccgccacatcagagtgttcgaacgtcaagcct
ttgatctctggcaagctaaaccctacggcttgtgccaagccacacattcccaaaaaggtc
aagatctcagatgtgagctttagggacatccgaggaacgtctgcaacaccacttttgctg
agaagcttggctgcggaagaggagtgccttgccagaaagtggagctttgctgatattaac
ttgaggtataatgggaggaacggggccgccacgtcgcagtgcgcgaatgtaaagcctacg
atcaccgggaaatcatccccgcccctctgcgcggggttgcgaagttga
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