Eucalyptus grandis (rose gum): 120291228
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Entry
120291228 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120291228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
egr04040
]
120291228
Ion channels [BR:
egr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120291228
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
120291228
NCBI-ProteinID:
XP_039164242
LinkDB
All DBs
Position
3:complement(31676298..31680312)
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AA seq
738 aa
AA seq
DB search
MDSKKTEKFVRFYNDEKQNLGVSWEKNDPTHFEKPLPLYKIPAAPTLLRPDGDPASRIKA
NYKAPRFGTFKVFPEGQEPRKSRILDPGGEIFLQWNRIFLFSCLVALFVDPLFFYLPSVV
SRDGSSCLTTDVSLGIVVTCFRTLADAFYILHVVVKFRTAYVSPSSRVFGRGELVMDPKK
ISRRYLRLEFWVDLLAALPLPQIVIWFIIPAIRSSHSDHTTNTLVLIVLLQYIPRLYLIF
PLSSQLIKATGVVTKTAWAGAAYNLVLYMLASHVLGASWYLLSMERHATCLKSTCDQEFS
PVKCHLRYLDCDMLDDGQRVTWGNSTSVFSNCDPNGNIVFQYGIFEKALTENVVSSDFLE
KYLYCLWWGLQQLSSYGQNLSTSMFIGETSFAILIAILGLVLFAHLIGNMQTYLQSLTVR
LEEWRLKRRDTEEWMRHRQLPXDLRDRVRRFVQYKWLATRGVDEESILHTLPADLRRDIQ
RHLCLDLVRRVPFFSQMDDQLLDAICERLKSSLCTQGTYIVREGDPVTEMLFIIRGRLDS
STTNGGRTGFFNSITLRPGDFCGEELLTWALLPKSTLNLPSSTRTVRALDEVEAFALRAE
DLKFVANQFRRLHSKKLQHTFRFYSHHWRTWGACFIQAAWRRHKKRMLAKSLSMRESWWA
SEEHRTPEDETEEHGEEEGDQGIASSASSQVMQHLGVTILASRFAANTRRGAQKAKDVVL
PKLQKPEEPDFSAEPDDE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggactcgaagaagacagagaagtttgtaagattttataatgatgaaaagcaaaatctt
ggcgtttcatgggaaaagaacgatcccacgcactttgaaaagccattgcctttgtataag
ataccggcggcgccaaccctgctgagacccgatggcgatcctgccagtaggattaaggcc
aattacaaagctccaagatttgggacgtttaaggttttccctgaaggccaggagccgcgg
aagagccggattctcgatccggggggcgaaatcttcttgcagtggaacaggattttcctc
ttctcctgcctggtggcgctgttcgttgaccccttgttcttttacttgccgtcggtcgtg
agccgtgatggctcgtcgtgcctgaccaccgatgtgagcctggggattgtggtgacgtgt
ttccggacgctggccgatgccttttacattctccatgtggtcgtcaagttccggacggct
tatgtttccccgagctcgagagtgtttggaaggggcgagctcgttatggatccgaagaag
atttccaggaggtatttgagattggagttctgggtcgatttgcttgcggcattgcctctt
ccgcagattgtgatctggttcatcatacctgcgataagaagttcgcactcggatcacacc
accaacactctcgtactgattgttctgctccagtacatcccgagattatatctgatcttc
ccattgagttctcagttgatcaaagccactggcgtagtcacaaaaactgcttgggctgga
gcggcatacaatctcgtgttgtacatgttagccagtcatgtcctgggcgcgtcatggtat
ctgttgtcgatggagcgacacgctacgtgcttgaaatccacatgcgaccaggaatttagc
cccgtgaagtgccatcttcgttacctggactgtgatatgcttgacgatggccagcgtgtc
acatggggcaacagtacgagtgtctttagcaattgcgacccgaatgggaatatcgtgttc
caatatggcatattcgagaaagctttgacagagaacgtcgtgtcctcggattttctcgag
aagtatctgtactgtctctggtggggattgcaacaattaagttcatatggccaaaatttg
agtacaagcatgttcattggggagacctcgtttgccatactcatcgcgatcctcggcctt
gtcctgtttgcccatttgattggaaacatgcagacgtatctgcaatctctcactgtgaga
cttgaggagtggcggctcaagcggcgggacacagaggagtggatgagacaccgtcaactc
cccnaagatctacgggaccgtgtccggcgcttcgtgcagtacaagtggctagcgactcgt
ggcgtcgatgaggaatcgattctgcacactttgcctgctgatctccgtagagatatccag
cgccacctatgcttggacctcgtgcggcgagtcccctttttctcgcaaatggacgatcag
ctgcttgatgccatctgcgagcgcctcaagtcctcactgtgcactcaaggcacatacata
gtccgcgaaggcgacccggtcactgagatgctcttcatcatcaggggcaggctagatagc
tcgactaccaacggagggcggacggggttcttcaattcgatcaccctgaggcccggcgac
ttttgcggggaggagctactcacgtgggcgttgctccccaagtcgactctcaacctgcct
tcttccacgagaacggtgagagctctggacgaagtggaggcgttcgccctgcgggcggag
gatctcaagttcgtcgcgaaccagttcaggcgcctccacagcaagaagctgcagcacacg
ttccgcttctactctcaccactggaggacgtggggggcatgcttcattcaggcagcgtgg
cgcagacacaagaagagaatgctggccaagagtctcagcatgagggagtcctggtgggct
tccgaggagcacaggacgccggaagatgaaacggaagagcatggggaagaagagggggac
cagggtattgcatcctcggcttcctctcaagtgatgcaacatctgggcgtcacaatattg
gcttctagattcgcagccaacacaaggagaggagctcagaaggcgaaagatgtcgtgttg
ccaaagctgcagaagcccgaggagccggacttctcggcagagcccgacgacgagtga
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