Eucalyptus grandis (rose gum): 120291822
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Entry
120291822 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120291822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
120291822
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120291822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_THOC3
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ASA1
Beta-prop_VPS8
Beta-prop_HPS5
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_NOL10_N
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_EIPR1
DSE1_N
Beta-prop_LRRK2
Beta-prop_IP5PC_F
PEP5_VPS11_N
TRM82_WD
WD40_like
Beta-prop_RSE1_2nd
WDCP
Motif
Other DBs
NCBI-GeneID:
120291822
NCBI-ProteinID:
XP_039165501
LinkDB
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Position
3:complement(33205173..33217465)
Genome browser
AA seq
529 aa
AA seq
DB search
MGIFEPYRAVGYITTGXPFSVQRLGTETFVTVSVGKAFQVYNCAKLSLVLVGPQLPKKIR
ALASYREYTFAAYGSDIGVFKRAHQLATWSGHTAKVCLLLLFGEHILSVDVDGNAYIWAF
KGMNDNLSPVGHILLDSNFTPSCIMHPDTYLNKVILGSQEGPLQLWNISTKTKLYEFKGW
NSSVSSCVSSPALDVVAVGCADGKIHVHNIRYDEELVTFSHSMRGSVTALSFSTDGQPLL
ASGSSSGVVSIWNLDKRRLQSVIRDAHDGSIISLHFFANEPVLMSSSADNSIKMWIFDTS
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQRHVSKR
AKKLKLKEEEIKLKPVIAFDVAEIRERDWCNVVTSHMDTPQAYVWRLQNFVIGEHILRPC
PDKPTPVKACTISACGNFAILGTAGGWIERFNLQSGISRGSYIDQXEGTNSAHDGEVVGV
ACDATNTLMISAGYAGDIKVWDFKGRELKSRWESGSSLVKISYHRLNGN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggggatattcgagccgtacagagcggtcggatacatcaccaccggcngtcccttctcc
gtccagcgcctcggcaccgagaccttcgtcaccgtcagcgtcggcaaggctttccaagtg
tacaactgcgcgaagctgagcttggtgcttgttggtccccaattgccaaagaaaatacgg
gccctcgcatcgtaccgtgaatacacttttgctgcttatggaagtgacattggcgtattc
aagcgtgctcaccagttagcaacttggagcgggcatactgctaaggtttgtttgctgctg
ctgtttggagagcacatattgagtgtagatgttgatggcaatgcatacatatgggcgttc
aaaggaatgaatgacaacctttccccagtgggacacatcttgttggatagcaattttact
cctagctgtataatgcatccagacacttacttaaataaggttattctgggaagccaggaa
gggcctctgcagctttggaacataagcactaagacaaagctctatgagttcaagggatgg
aattcctctgttagcagttgtgtttcatcacctgctttagatgttgttgcagttggctgt
gctgatggcaagattcacgttcacaatattcgctatgatgaagaattggttacattttct
cattcgatgagaggttctgtgaccgccttatctttcagcacagatgggcagcctcttcta
gcttctggtagttcatctggtgttgtcagcatatggaatctcgataaaagaaggctccag
tcagtcataagagatgctcatgacggttctataatttctctccacttctttgctaatgag
cctgtgctaatgagttcatctgcagataactcaattaagatgtggattttcgacacaagt
gatggagatcctcgtctattacgctttcgaagtggtcatagtgctcctccactctgcata
aggttctatgctaatggtaggcatatactatcagctggtcaggatcgtgccttccggctt
ttctcagttgtccaggatcagcaaagtcgagagctatctcaacgtcatgtgtccaagcga
gcaaaaaaattgaagttaaaggaagaagagataaagctgaagcctgttatagcatttgat
gttgctgaaattagggagcgggactggtgcaacgtagtgacaagtcatatggataccccg
caggcatatgtgtggagacttcaaaattttgtcataggggagcatattctgagaccatgc
cccgacaagcccacacctgttaaggcttgcacgattagtgcatgtggaaattttgccatt
ttgggaacagcaggtggttggattgagcgattcaaccttcaatcaggaattagtcgagga
agttacatagaccagnttgaaggaacaaacagtgctcatgatggtgaagtggttggagtg
gcttgtgatgccacaaatactctcatgataagtgccggttatgctggggacatcaaggtc
tgggatttcaagggacgtgaattgaaatctagatgggaaagtggttcttctttggtaaaa
atatcttaccatcgtctgaatggtaattaa
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