Eucalyptus grandis (rose gum): 120292137
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Entry
120292137 CDS
T03547
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120292137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
120292137
03036 Chromosome and associated proteins [BR:
egr03036
]
120292137
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120292137
Coactivators
SAGA/TFTC/STAGA complex
120292137
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120292137
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
ParG
Motif
Other DBs
NCBI-GeneID:
120292137
NCBI-ProteinID:
XP_039166041
LinkDB
All DBs
Position
3:44486749..44495172
Genome browser
AA seq
881 aa
AA seq
DB search
MDLSIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDASTSRPSSSDKGVSQGDNHMPSQ
SYPGWQPTSQAENANSQIQQEQKNADQEQMLAQMQRQQGDSLADPQQNNTLEEVNHQHLK
QKQVQDGHQLGQGEQNSLQIKQSPGMPVSENNSLPVSEPGRVQTLDSESQYLKLQQMSNQ
QATVPGQAPNKANRVKQVPFALLLPVILPQLDKDRAMQLQTLYAKLKKNEIAKDGFVRIM
RGIVGDQMLKLAVMKMQTQPPPQLHIQGQTSALPQHPRMQPASAAKFNDSSSSGQVHSTM
DRNGPKAGEVERIPDSQFMQQQHFQNMQTFPKYGSPGGYHPFSGTNMTSSASSVKTQPND
AQMKQIPIHQNMGSSHPGGSTQAMSLATAPKFDRQHPNNDNKRAQSGSLPPFASNISLQQ
NSVPWKPSTSKDQSSGAFSSSVYVKHEPVDQPSDQQKQQLSSLPGLSSVSAGHLEQRMPI
SGSSRDNSFDPQSPGVGFLTPTGAGTSRQDSLSATPAQDTNVQLGSRTASTPAGNNARTP
SKKPSVGQKKPLEALGSSPPPSGKKQKVSGSFADQSIEQLIDVTAVSGVNLREEEEQLFS
GPKEDSRVSEASRRVVQEEEETLILQRAPLQKKLAEIMARCGVKTISNDVERCLSLSVEE
RLRGLLCNLIRVSKQRVDIEKPRHRTIVTSDVRQHLMTLNRKAREEWEKKQAEAEKLRKQ
SEPDSNQGVDGDKEKDENRGKSVKVNKEEDDKMRATAANVAARAAVGGDDVLSKWQLMAE
KARQKREGGLEVASQVGKDSQKSSISGRSNKDNQEAGKKGQAASGANRKLGRNQAFASQP
KVARTISVKDVIAVLEREPQMSKSSLIYRLYDKVGSEKSGE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatctttccataatgaagcttctggaagaagatgaggacgaaaccatgcactcaggg
gctgacgtggaggctttccaggctgcccttaatcgtgatatcggaggtgatgcatcaact
tctcgaccatcatcatctgataaaggtgtctctcaaggagacaaccatatgcccagccaa
tcatatcctggatggcaacctactagccaggctgaaaatgcaaattctcaaattcaacaa
gaacaaaaaaatgcagatcaggaacagatgttggcacagatgcaacggcaacaaggtgac
tctcttgctgatccccaacaaaataacactttggaggaagtcaatcaccagcatttgaag
cagaaacaagtgcaagatggtcatcaactagggcagggagaacaaaattctcttcagatt
aaacaatctcctggcatgccagtgtcagaaaacaattccctccctgtaagtgagccaggt
agagtgcagacactagacagtgaatctcagtacttgaagttacagcaaatgagtaatcaa
caggcaacagtccctgggcaagcaccaaataaagcaaatcgcgttaaacaagttccattt
gcattattgctccctgtgattcttccccagcttgataaagatagagccatgcaactgcaa
actctttatgccaaactgaagaaaaatgaaattgccaaggatggatttgtgagaatcatg
cgaggaattgttggagatcagatgctgaagctggcggttatgaaaatgcaaacgcagcct
cctccacagttgcatatccaaggtcaaacttcagctctaccgcagcaccctagaatgcag
cctgctagtgctgcaaaattcaacgattcatcttcatcaggccaagtccattccacaatg
gatagaaatggtccaaaggctggagaggtggaaaggataccagattctcaattcatgcaa
cagcagcattttcagaacatgcagacattccccaagtatggaagtcctggtggttaccat
ccattcagtggaacaaatatgactagttctgcttcatctgtcaaaacacaacctaatgat
gcacaaatgaagcagatcccaattcatcaaaacatgggttcaagtcatccaggaggatca
actcaggcaatgagcttggcgactgcaccaaaatttgatcggcagcatcctaacaatgat
aacaagagagcgcaatctggttctctccctccatttgcaagcaatatatcactccaacaa
aattcagttccttggaagccctctacttctaaagaccaaagttctggtgctttctcatca
tcggtgtatgtgaaacatgaacctgttgatcagcccagtgatcaacaaaaacaacagtta
tcttcccttccaggactgtcttctgtttcagctgggcatcttgagcaaagaatgcccata
tcaggaagctctagggacaattcttttgacccgcagtctccaggagtgggtttcttgact
cctacaggtgctgggacttcacgtcaggattctctatctgcaacaccagctcaggatact
aacgtccagctaggctcccgtacagcatccacaccagcggggaataatgcaaggacgcct
tctaaaaaaccttctgttggccagaagaagccacttgaggcacttggttcttcgccacct
ccttcaggtaagaagcaaaaggtatctgggtccttcgcagatcagagcatcgaacaactc
attgatgtcactgctgttagtggggtcaatctcagggaagaagaagaacagctgttttct
gggccgaaggaagacagtcgagtctcggaagcatcccgaagagttgtccaagaggaagaa
gaaactctgatattgcagcgagctcccctgcagaaaaagttggccgagatcatggcacga
tgtggtgtgaagacaataagcaacgatgtggagcggtgtctgtctttgagtgtggaggaa
aggctgcgtggactgctgtgcaatttaattagagtctcaaagcagagggttgatatcgag
aagcccagacaccggaccattgtcacttccgatgtccgccagcaccttatgactttgaac
cgcaaggctagggaagaatgggagaagaaacaggctgaagcagaaaagctaaggaagcaa
agtgagcctgatagcaatcagggagttgatggtgataaagaaaaggatgaaaaccgtggg
aaatccgtgaaggtaaacaaagaggaagatgacaaaatgagagcaactgctgcaaatgtt
gctgcccgagctgctgtgggaggagatgacgtgttgtccaagtggcagcttatggctgaa
aaagcccgtcaaaaacgtgagggaggattggaagtggcatctcaggtcggtaaagacagt
caaaaatcttcaatctctggaagaagcaataaggacaatcaagaagcaggaaaaaagggg
caagctgcatctggggccaatagaaaattagggaggaaccaagcctttgcatcacaaccg
aaggtagctcgtacaatttctgtgaaggacgtcattgctgttctggaaagggaacctcag
atgtcaaagtctagtctcatatatcgcctctatgataaagtcggttccgagaaaagtggt
gaataa
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