Eucalyptus grandis (rose gum): 120294616
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Entry
120294616 CDS
T03547
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120294616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
120294616
03400 DNA repair and recombination proteins [BR:
egr03400
]
120294616
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
120294616
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120294616
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
120294616
NCBI-ProteinID:
XP_039170838
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Position
6:complement(50486175..50494900)
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AA seq
859 aa
AA seq
DB search
MEGVKVLASGFEVDEKAEIEKLVTSMGGILQSKTLADVSFVIAKNVLAAKYKWALNVLKK
PVVTINWLYQCRNEHRVVPQESYRVLPFSGLTISVTGIPADARKEIQKSLTQNGGKYSAE
LTRKCTHLIAEAPEGDKYKVAKRWGHIHIVNRKWFDQSTSRKACLNEESYPVQGSSMSSV
KTASSQQNQDRVIGSSQSLPSSIVGDRDFHSISATDHADPDLETTLSQNVSSMFVDPHVL
GKEDSGEVPAVQSNGEVNHDGCVAADSENEDNDLYLSECRLTLVGFESSELRNLVNMVRR
GGASRYTTLNERLTHVVVGLPSESEKKEVRSIASMGLINVVRRGWLEDCDREKKEVPVLQ
KHIALDLLVPKGSICFSKGPAINAISMNQGSSNCAPPKIPADQMLSNSNGEVRVSFDKRE
QERITNGRTSLEGVAKPSELNVSHPISNEDKVPKKTWSNCITQDGKASSVFKGRTFHFSN
TFPEDRRDEIIEWVNQGGGAVVGDHETQNVHFMIECHGVKPKDHITGTIYVSSHWIRCCL
EDGYLLDVDSHVLYSPLPCRVPLPGFESLRFCVSQYEEKDRLLLRNLCFTLGAKFVLKLT
RKVTHLLCKFRNGQKYEAACKWGIKSVTCDWIYECVRQNKLIPSEQFCPKEVSEQEAGLC
AMTQFPSQIVQTISGDHPSQFPSQSQDMRITQNQNRHRFSWEEIDNSSSSKKARVTPDNA
PKDLCSFREHLSYPTNNSDCSKGEKLNNSGEAADAVPDVAAAIEDLLEQTSKIHDLKSPV
RIACDRGQEHSGPPTVVGLSKQWINRSQKNENICNPSVNANALDGFSETQTDSQVVGYEE
DLSGRQMIIDRVRTQSSMS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgtcaaagtccttgcttctggttttgaggtggatgagaaggctgagattgag
aaattggtaacttcaatggggggaattctacagtctaaaactttggctgatgttagcttc
gtaattgcgaagaatgttttggctgcaaaatacaagtgggctttaaatgttctgaagaaa
cctgtcgtcaccattaattggttataccaatgccgtaatgagcaccgtgtggtacctcag
gagtcttacagagttcttccattttctggattgacaatatccgtcactggaattcctgca
gatgcgcggaaggagattcagaagtctctcacacaaaatggtgggaaatattctgcagaa
ttgaccaggaagtgcactcatttaattgcagaagctccagaaggtgataagtacaaggtt
gctaaaagatggggtcacattcatattgtgaatcgcaaatggtttgatcaatcaacttcc
aggaaagcatgtcttaatgaggagtcctatcctgttcagggtagttccatgtcttcagtg
aaaactgcaagtagtcagcaaaatcaggacagagttattggaagttcacagtctctcccc
tcttcaatagttggagatcgggacttccattccatttcagctactgaccatgccgatcca
gatttagaaactactctctcacagaatgtgtcttcaatgtttgtggatccccatgtcctt
ggaaaagaggatagtggtgaagtgccagctgtgcaatccaatggtgaagtgaatcatgat
ggttgtgttgctgcagactctgaaaatgaagacaatgacctgtatttgtcagaatgtagg
ttaacgctagttgggtttgagtcttctgaattgcgtaatctagtcaatatggtgcggaga
ggaggagcctctcggtatacaactctaaacgaaagattgacgcacgttgtagttggatta
ccttcagaaagcgagaaaaaggaggtaagaagcattgcctcaatgggtcttataaatgtg
gtgcgaagaggctggcttgaagattgcgaccgtgaaaagaaggaagtccctgtcttgcag
aagcacattgcccttgatctactcgtcccaaaaggatccatatgcttcagcaagggacct
gccatcaatgcaattagcatgaaccagggaagcagtaactgtgctccacctaaaattcct
gctgatcagatgttgagtaattctaatggggaagttagagtatcatttgataaacgcgag
caggagcgaattaccaacggcagaaccagtcttgaaggagtagcaaaaccatcagagctt
aacgtttctcatcccataagtaatgaggataaagtccctaagaagacgtggagtaactgt
attactcaggatgggaaggcatctagtgtgtttaaggggagaacttttcatttctccaac
acctttcctgaagataggcgtgatgaaattattgaatgggtaaatcaaggaggaggtgca
gtggtgggtgatcacgaaacacagaatgttcatttcatgattgagtgtcatggcgtaaag
cccaaagaccatatcaccggaactatttatgtgtccagccactggattcggtgttgttta
gaggatggatatttgctggatgttgatagtcatgtcctctattctccacttccctgtcgg
gttcctcttccagggtttgagagtctccgcttttgtgtttcccagtatgaagagaaggat
cgacttttactaagaaatttgtgttttactctgggagctaagtttgtgttaaagctgact
agaaaagtcacgcatctattgtgcaagttcagaaatgggcaaaagtatgaggcagcgtgt
aaatggggtataaagtcagtcacatgtgattggatatatgagtgtgttaggcagaacaag
cttataccttctgagcaattttgcccgaaagaagtttctgaacaagaagcaggattatgt
gctatgacccagtttccttcacagattgtccaaacaatatctggagatcatccatcacag
tttccaagtcaatctcaagacatgagaattacccagaatcagaaccgacacaggttctct
tgggaagaaattgacaactcaagttctagtaaaaaggcaagagtcactccagacaatgcc
cccaaagatttgtgctcatttagagaacatcttagttaccctaccaacaacagtgattgc
agtaaaggggagaaattgaataattctggggaagctgcagatgctgttcctgatgttgct
gcagctattgaggatttgctggagcaaacaagcaagattcatgatctgaagtctccagtg
aggattgcgtgtgatagaggccaagagcattcagggcctcctacagtagttggattgtcc
aagcaatggataaacaggagccagaagaatgagaatatctgcaacccttctgttaatgca
aacgcccttgatggttttagtgagacacaaactgattctcaggtagttggttatgaggaa
gatttgtcaggtcggcaaatgattatagatcgagttcgaacacaaagcagcatgagctaa
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