Eucalyptus grandis (rose gum): 120295751
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Entry
120295751 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egr03041
]
120295751
Spliceosome [BR:
egr03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120295751
Other components
Complex C specific factors
120295751
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
120295751
NCBI-ProteinID:
XP_039173236
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Position
7:16479896..16483643
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AA seq
859 aa
AA seq
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MDEDQEMERFGMDNDYDDGQWIDGEFYYRQRREKRAQTKDDALYGVFASGDSDSDYDDSS
KRKRRKNRDLHGKADLSKPVNFVSTGTVMPNREIDENSKTENEDDESADVDEDRPGLGVG
AGVGLGFKKRDDGFDENGEEEDGFLPTAFGRKIKEGAERRREQSKLEKKAQQGGAKRDSY
ESGNVGGFEKYTKGIGMKLLEKMGYRGGGLGKNQQGIVAPVEAKLRPKNMGMGFNDYKET
PAKAPVASLEPEEKKPLPDVPGKEKLWSKQMKRATLKNKAKYITAEELLAKKQEQGVEVV
QKVLDMRGPQVRVLANLENLNAEEKARESDVPMPELQHNIRLIVDLAELDIQKIDRDLRN
EKETALSLQEEKEKLQAEAELQKKQLNNVKEIMNTLGQIEEEKSMGTLTLDLLANSFGDM
LRRFPDDYKLCNLSCIACSFALPLFIRVFQGWDPXSNPSHGLEVVSRWKSLLQGQECLDI
WDLGSPYTQLVSEVVLPAVRISGINTWEARDPEPMLHFLETWEKLLPSSVLQSILNMVVM
PKLSSAVDSWDPRRETVPIHVWVHPWLPLLGQKLEGHYQIIRSKLSNVLHAWHPSDGSAY
TILSPWKTVFDSASWEDFMRRFIVPKLQLVLQEFQINPADQKLDQFNWVMSWASAIPIHL
MVDLMEKFFFVKWLQVLYHWLCSNPDFNEVMNWYRGWXESFPQELLANESIRYQLRIGLD
MMDNAAEGMEVAQPGVKENLSYHRVLEQRQFEAQQKAAAYARQQAAVGAGGTSHMDAAGG
MPEMKLKEVIEAYAQQHELLFKPKPGRMHNGLQIYGFGNVSIIVDSINQKVFAQNEEAWS
LVSLEDLLKMHYSSLAKRR
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaccaggaaatggagaggttcgggatggacaacgattacgacgacgggcag
tggatcgacggggagttctactaccggcagcggagggagaagcgcgcgcagaccaaggac
gacgcgctctacggcgtcttcgcgtcgggggactccgattcggactacgacgactcctcc
aagaggaagcggaggaagaacagggacctccatggtaaggccgatctgtcgaagcccgtg
aatttcgtgtccaccggcacggtcatgccgaacagagagattgatgagaattcgaagaca
gagaatgaggatgacgagtccgctgacgtggatgaggataggccgggcttgggggttggt
gctggggtgggtttggggtttaagaagcgggacgatggtttcgatgagaatggcgaggag
gaggatggtttcttgccgacggcatttgggcggaagatcaaggagggagcggagaggagg
agagagcaatcgaaattggagaagaaagcgcagcaaggtggggctaagagggattcttat
gaatcggggaacgtgggcggcttcgagaagtacaccaagggaattggaatgaagttgctc
gagaaaatgggttacagagggggtggtcttgggaagaaccagcaggggattgtggcaccc
gttgaagcaaagttgcgtcctaagaatatgggtatgggtttcaacgactacaaagaaact
cctgcaaaggcgcctgttgcctcattggagccagaggaaaagaagccattacccgatgtg
cctggtaaggagaagctttggtctaagcaaatgaagagggcaacactgaaaaacaaagcg
aaatatattacagcagaagagctgttggcgaagaagcaggaacagggtgttgaagttgtg
caaaaggtacttgacatgcgcggacctcaggttagggtattagcaaacttggagaatctg
aatgcggaagagaaggcgagggagagtgatgttcctatgcccgagctccagcacaatata
aggttgattgtggacctggctgagttggatattcagaagatcgatagggatctgaggaat
gagaaggagacagctctgagcttgcaagaggaaaaagagaagttgcaagctgaggcagaa
ctccagaagaaacaactaaataacgtgaaggagataatgaatacactaggccagattgag
gaggaaaagtcgatgggaacattgacgttagacttgctagccaattcttttggtgacatg
ctaagaaggtttcctgatgattataaactttgcaacttatcctgcattgcttgctcattt
gcactccctctgtttatcagagtatttcagggatgggatcctncttcgaatccctcacat
gggttggaagttgtttcaaggtggaaatctctattgcaaggacaggaatgtcttgatata
tgggatttgggatccccttatacccagttggtttcagaagttgtcttgcctgctgtgaga
atatcaggcattaacacttgggaggcaagggatccagaaccaatgcttcatttcctcgag
acatgggaaaaattgttgccttcttctgttctgcagtctatactgaacatggttgttatg
ccaaaattgtcgagtgccgtggactcgtgggacccccgtcgagaaactgttcctatccat
gtctgggtgcatccgtggttacccttgttgggacaaaagttggagggccactatcagatc
atacggtcaaaactgagtaatgtacttcacgcctggcacccgagtgatggctctgcgtac
accatattgtcaccttggaaaactgtgttcgattctgccagttgggaggattttatgcgc
cggtttatcgttccaaagttgcagcttgtcctccaggagttccagataaacccagctgat
cagaagctggatcagttcaattgggtcatgtcttgggcctctgctatcccaatccatctc
atggtggacttgatggagaagttcttttttgttaagtggctacaggtgttatatcactgg
ttgtgttctaacccagacttcaatgaagttatgaactggtatcgaggttggncggaatct
tttccacaagagctgctagcaaatgagagtatcagatatcagcttagaattggtctagac
atgatggacaatgcagctgaaggcatggaggttgcccaacctggtgttaaagaaaactta
agttatcatagggtccttgagcagaggcagtttgaggctcagcagaaagcagcagcttat
gctcgacaacaagctgctgttggtgctggtggtacctctcatatggatgctgccggtgga
atgcctgagatgaagctaaaagaagtcatcgaggcctatgcgcagcagcatgagttgcta
ttcaagcctaaacctggtcggatgcacaatggccttcagatatatggttttgggaatgtg
agcatcattgtggactctattaatcagaaggtatttgcccaaaacgaggaagcatggtct
ttggtatctcttgaggatctgctgaagatgcattacagttcactggcaaagagacgttag
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