Erythranthe guttata (spotted monkey flower): 105949385
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Entry
105949385 CDS
T07346
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105949385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105949385
Spliceosome [BR:
egt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105949385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
PRP4
NBCH_WD40
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SCAP
eIF2A
WD40_like
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
105949385
NCBI-ProteinID:
XP_012828139
UniProt:
A0A022PSD0
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MDIDEENTVSTSIDTDASVPLDGSETVASAIDAISLQPAEPIVASINPTPVTPPMAPIPS
VPRPLAPLPPRPPVTRPLAPQNGDSRTSDSDPDEDEEPRTNRAASGSAQEYEISEESQIV
RERHEKAVQELLMKRRAAALAVPTNDNAVRSRLRRLGEPITFFGEREMERRDRLRALMAK
LDAEGNFERLMKAQEEEEEAAAASVAPSELEEDVQYPFYTEGSQGLLRARREILKYSIVK
SALRLHRAKRKREDPDEDLDAEVDWSLKQAANMVMECSEIGDDRPLSGCSISYDGKTLAT
CSLSGVAKLWSMPEVKKVAALKGHTERATDVAFSPTSNHVATASADKTARLWNLEGSVLR
TFEGHLDRLARISFHPSGRYLGTASFDKTWRLWDVETGEELLLQEGHSRSIYGVSFHHDG
SLAASCGLDALARVWDLRSGKSILALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLR
KRKSLYIIPAHSNLISQVKFEPQEGYFLVTASYDMTAKIWSSRDFKPVKTLSGHESKVTS
LDIVGDGQDIVTVSHDRTIKIWSSRKAEKENAMEVD
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgatgaggaaaatactgtctctacctccatcgacaccgatgcttcagtccca
ctcgacggtagcgaaactgtagcttctgccattgatgctatctcacttcaaccagccgaa
cccatagttgcatccatcaatccaactccggtcacacctcctatggccccaataccttct
gttccaagaccattggctccactacctccccgtccacctgtcaccagaccattggcccca
caaaacggagactcaagaactagcgactccgatcccgatgaagacgaagagccaagaaca
aaccgtgccgcctcaggctcagctcaggaatacgagatctcggaagagagccaaattgtt
agggagaggcatgaaaaggcggtgcaggagcttctgatgaagcggcgtgccgccgccttg
gcagtccccaccaacgacaatgctgtccgatcaagactccggcggctcggcgagcctata
actttctttggtgagagagagatggagagacgcgatcgattgagggcgcttatggcgaag
ctcgatgctgaaggtaacttcgaaaggctgatgaaagctcaggaggaggaggaagaagct
gctgccgccagtgtggcgccttcggaactggaagaagacgttcagtatccgttttacacc
gaaggttcgcagggtctgttgagagcccgtcgagagattttgaagtactcgattgtgaag
tcggctttgcgcctccatcgtgcgaagaggaaacgggaggacccggatgaggatttggat
gcagaggttgattggtctcttaaacaggctgcaaatatggtcatggagtgcagtgagatt
ggcgatgaccggcccctttctggatgctcgatttcatatgatggaaagactcttgccacc
tgttctttaagtggagttgcaaagctgtggagcatgcctgaagtaaagaaggttgctgca
ctaaaggggcacaccgaacgagctaccgatgttgcattctctcccacaagcaatcatgta
gctactgcttctgccgacaaaactgcaagactatggaatttggaaggatctgtccttaga
acattcgagggccacctggaccgtcttgctcgtatttcattccacccatcaggtagatat
ttgggtacagctagtttcgacaagacttggagattatgggatgtagaaaccggtgaggag
ttgcttctccaagaaggtcacagtaggagtatatacggagtatcttttcatcacgatggc
tctttagcagcttcctgtgggctggatgctcttgctcgtgtgtgggaccttagatctggg
aaaagtattcttgctctggaaggccatgtcaagcctgttcttggtgttagcttttctccg
aatggttatcatttagctactggtggggaagacaacacttgcaggatatgggatttgagg
aagaggaaatctttgtacataatacctgctcattctaaccttatttctcaagtcaaattt
gaaccacaggagggttactttttggtcacggcttcgtatgatatgactgctaagatctgg
tcttcgagagattttaagcctgtaaaaacattgtctggccatgaatcgaaagttacatca
ttggatattgttggagatggacaagatatcgtaactgtttcgcatgatcggacaatcaag
atttggtcgagcagaaaagccgaaaaggagaatgcaatggaagttgactga
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