Erythranthe guttata (spotted monkey flower): 105949869
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Entry
105949869 CDS
T07346
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105949869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105949869
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105949869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
PIN_4
OB_Dis3
Rrp44_CSD1
OB_HELZ2
Rrp44_S1
CSD2
OB_RNB
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
105949869
NCBI-ProteinID:
XP_012828631
UniProt:
A0A022RUR8
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MLQSKSFVKKTKQGRVVKVVREHYLRDDIYCGAPLCKVCDVAASRLSSTASTILVVDTNV
VLHQIDLLENPAIDDVVVLSVVLEEVKNKNLGVYNRLRALCSNSQRRFFVFSNEYHKDTY
VKIETGESPNDRNDRAIRVAAQWYQNHLGSAVRVLLITNDRDNKKKAVTDGILAETVESY
VKSLGQPALLDLIVQPPSDDVTMEDAEDLRPSKRKTIYPEHKPMSEITSGLHRGIYHQGK
LRVNRYNPFEAYVGSESIGDEIIVYGRTNMNRAFDGDIVAVELLPQDRWQEEKSLAIAND
EDEEEDDVHLAPSSADDAPRVPSSAGDKNAMPTRPSGRVIGIIKRNWHSYCGSLDPMPMP
AGEGGIAHALFVSKDRRIPKIRMQTRQLGNLLDKRIIVAVDSWDRLSRHPSGHYVRTIGE
IGDRDTESEVVLIENDIDARPFSSQVLACLPPLPWSVSAEDISNPIRQDLRHLRVFSVDP
PGCKDIDDALHCMLLPSGHFEVGVHIADVTNFVHPGTPLDDEAATRGTSVYLVERRIDML
PKPLTEDVCSLRSDVERLTFSVIWEMTPEAEIISTRYTKAIIKSCAALSYVEAQARMDDS
RLMDPLTTDLRNMNVLAKIMRQKRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREAN
QMIEEFMLAANISVAKKILEHFPPTSLLRRHPSPTKEMLEPLIQTAAAVGLCLDVTSSKA
LADSLDRAVGEDPYFNKLIRILATRCMTQAVYFCSGDLSPPEFCHYGLAAPVYTHFTSPI
RRYADVIVHRLLAASLGICRLPDIFQERPRLTSIADNLNYRHKNAQMASRASVELHTLIY
FRNRPTDTEARILKIRSNGFIVFVPKYGIEGPVHLMARGQKEGGKWIVDEQQQKIKKIDG
QDSYGVLQTVRIHMEVVEPQPNRPKLQLTLI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaagcaagtcattcgtcaagaaaacgaagcaagggagagttgtcaaggttgtg
agagaacactatttgagagatgatatttactgcggtgcccctttatgcaaggtctgcgat
gttgccgcatcgcgtctcagctcaactgcctctactattctcgtagtcgataccaatgtt
gttcttcatcagattgatttgctggaaaatccagccatagatgatgttgtggtgctatca
gtggtactggaagaggtaaagaacaaaaatctcggtgtatataatagacttagggcgctt
tgcagcaactcccagaggaggttctttgtcttttctaatgaataccacaaggatacatat
gtgaagattgagactggtgaaagtcccaatgataggaatgacagagcaattcgggtggcg
gcacaatggtatcagaatcaccttggtagtgcagtccgcgttttacttattacaaatgac
cgagacaacaaaaagaaggccgttacagatgggattcttgcagagacagtcgagtcgtat
gtgaaatcgcttggacaaccagcattgcttgacctgattgttcagcctccatctgatgat
gttactatggaggatgcagaagatctaaggccctcaaagaggaaaacaatatatcccgag
cataagcccatgtcagaaattacttctggtttgcatcgtggaatttaccaccaaggcaag
cttcgggttaatcgctacaacccgtttgaagcatatgttgggagtgaaagtattggtgat
gaaattattgtttatgggcgtacaaacatgaatagggcttttgatggtgatatagtggct
gtggaacttttgcctcaagatcgctggcaagaagagaaatcgcttgccatagcaaatgat
gaggatgaagaggaagatgatgttcatttagctccaagcagtgctgatgatgctcctcga
gttccaagttcggctggggacaagaatgctatgccaactcgcccatctggtcgtgttatc
ggcattataaaacggaactggcactcttattgtggatctttggacccgatgcctatgcct
gcgggcgagggtggtattgcacatgctctgtttgtctccaaagatcggaggattcctaag
attcggatgcaaacccggcagcttggaaatctactggacaaaagaatcatcgttgctgtt
gattcatgggatcgattatctcgacatccttctggacattatgttagaactataggagaa
ataggcgacagagatactgaaagtgaggtggtgctgatagagaatgatattgatgccaga
ccattttcctctcaagttttggcatgtttgccaccgttgccttggtctgtatctgctgaa
gatatatcaaatcccattaggcaggatttgcgtcatttacgtgtcttcagcgtggatcct
ccaggttgcaaggacattgatgatgcattgcattgtatgcttcttccaagtggacatttt
gaagtgggagttcatattgccgacgtcacaaattttgttcaccctggaacccccttggat
gacgaggctgcaacaaggggtacctctgtctaccttgtggagaggcgtattgacatgctt
ccaaaacctctgacagaagatgtttgttcattgcgttcagatgtagagagactgaccttt
tctgttatatgggaaatgactcctgaagcagagattatttctacaaggtacacgaaggcc
attatcaaatcatgtgctgcgctatcttatgtcgaagctcaggcgaggatggatgatagt
cgcttgatggacccattaactacagatttgcggaatatgaatgtgttagcaaagataatg
aggcaaaaacgcattgaaagaggagccttaactcttgcttctgctgaagttaaattccaa
attgatactgaaactcacgatcctcttgacatcggtatgtatcaaattcgagaagcaaac
cagatgattgaggagtttatgcttgctgccaatatatctgtagctaaaaaaattctggaa
cattttcctccgacttctctgttaagacggcatccaagcccaactaaagagatgcttgaa
cctttaattcaaacagctgctgccgttggtctctgtttggatgtgacatcttctaaagca
ctggctgactcacttgatcgtgctgtgggcgaagacccatacttcaataagctgattcgc
attctggcaacaaggtgcatgacacaggcagtgtacttctgcagtggagatctgagccct
ccagagttttgtcattatggtcttgccgctcctgtgtatacacatttcacttctcctata
agaagatatgcagatgtcattgttcaccgtctgctagctgcatccttggggatatgcagg
ctcccggatatattccaagaaagacctcggcttactagtattgctgacaatctgaattat
cggcacaagaatgcccagatggctagccgggcctcagttgagctccatacactcatttat
ttcaggaataggcccactgacactgaggcgagaatactgaaaataagatcgaatgggttc
attgtttttgtgccaaaatatggaatagaaggaccagtacacttgatggcgagaggacag
aaggaaggaggaaaatggatagttgatgagcagcagcaaaagattaaaaagattgacggt
caggattcttacggcgttcttcagacggtcaggatccacatggaggtggttgagccacag
ccaaataggcccaagctccagcttacccttatctag
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