Erythranthe guttata (spotted monkey flower): 105949980
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Entry
105949980 CDS
T07346
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105949980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105949980
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105949980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
HWE_HK
Motif
Other DBs
NCBI-GeneID:
105949980
NCBI-ProteinID:
XP_012828749
UniProt:
A0A022PPF0
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MEIDQSEEESTRMSDILRNLSTKGALPTSLAKLSGSSHIIPSQKDFHFYNNFNEFKTPVQ
EIDNKSKNLLEKVGASENLFGKPIPLPDDKRVELDDDVALDWLVNVNDEIFERFDVSLDE
FKRLRKKEEESGVRTMRLDDDEEDGFQMVYGKKNKKSAAGSERNVNGGVKAVHEVKVIER
VKPKIPFHIPTIPRPQDEYKIIVNNTNQPFEHVWLQRSEDGSKFVHPLEKLSVLDFVDKS
SSSADPVKPLSLEDTPFYFVEEVKDLKQLAVKLRSADEFAVDLEHNQYRSFQGMTCLMQI
STRTEDFVIDTLKLRIHIGPHLREVFKDPTKKKVMHGADRDIIWLQRDFGIYVCNMFDTG
QASRVLKLERFSLEYLLNHFCGVTANKEYQNADWRIRPLPREMIKYAREDTHYLLYIYDL
MWLRLLESPTDPESSDPPLIEVYKRSSDICTQLYEKELLTDTSYLHIYGLQGADFNAQQL
AVVSGLCEWRDVVARAEDESTGYVLPNRTLIEIAKQTPLTTSQLRRALKSKHPYIERNLG
SVVSIIRHSIQNAAAFEETSKQLKERKLELANVENTLATEESEVLPSEATEILNAGEADN
IQNSTLTFENSLDPIQPMDVSENFSSAKAEVANAEPEKSMFSLKTNDTTASDQSASHVAE
ATVQLLKKPSRAFGALLGNSGKRKFDTDKREKEETKLEQIKSTVSLPFHAFTGKDEKLQQ
NFQEPPSKASEDSHKEEPSIPATGSTMEDIIVLDDDVSDIEEAANEDNSDKKQSENKEEA
DEEGDEPMSLSDLSSSFQKCFPSLDQTKTPKVADKSQPSDGFLQVKPFDYEAAREEMKFG
VGQSKEKGADNNKRDKKKVSTVTKSEKDEGPATDLPQGRRRQAFPASGNRSATFR
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgatcaatcggaagaagaaagtacgaggatgtctgatatcttacgcaatctc
tcgacgaagggcgcgctgcccacttccctggcgaagctctccggttcgtcgcacataatt
ccgtcgcaaaaggacttccatttctacaacaatttcaacgaattcaagacccccgttcaa
gaaatcgacaacaagtccaaaaatctgctggagaaggtcggtgcgtcggagaatttattc
gggaagccaatccctttaccggatgacaagcgtgtcgaattggacgatgacgtggcgctc
gattggctggtgaacgtgaacgacgagattttcgagagattcgatgtgtcgttggatgag
tttaagcggctgaggaagaaggaagaagagagtggggtgaggacgatgagattggacgat
gatgaagaagatgggtttcagatggtttatgggaagaagaataaaaaatcggctgcaggt
tcggagaggaatgttaatggaggagtgaaagcggttcatgaagtgaaggtgattgaaaga
gtgaagccgaagattccgtttcatatacctacgataccgaggccgcaggacgagtataag
attattgtgaataatacaaaccagccgttcgagcatgtctggttgcagaggagtgaggat
ggctctaagtttgtacatcctttggagaagctgtccgttcttgattttgttgacaaaagt
agtagtagtgccgaccctgtaaaacctctttcactcgaagatacgccattctattttgtg
gaagaagtgaaagatttgaagcagttagcagttaaattgcgaagcgctgatgagtttgcg
gttgatttggaacacaaccaatacaggtcatttcaagggatgacatgcttgatgcaaata
tcaacaagaactgaggattttgttatagatactctgaaacttcgcattcacattggtcca
catctcagagaagtattcaaagacccaactaagaaaaaggtgatgcatggagcagaccgt
gatatcatatggcttcaacgagactttggcatttacgtctgtaatatgtttgacactgga
caggcatcaagggtattgaaattggaaaggttcagcttggaatacctattgaatcatttt
tgtggagttacagcaaacaaagaataccagaatgcagattggagaattagaccactcccc
cgtgagatgatcaaatatgctagagaagatacacattatttgttgtacatctatgatctt
atgtggctgaggttgctcgaatcacctactgatcctgaaagttctgatcctcctcttatt
gaggtctacaaacgcagttccgatatatgcactcaactctatgaaaaagagcttcttaca
gatacttcataccttcatatttatgggttgcaaggggccgatttcaatgcgcaacagcta
gctgttgtttctggactttgtgaatggagagatgtcgttgctcgtgctgaagatgagagc
actggttatgttttgcccaataggactcttattgaaattgctaaacagacgcctctcacc
actagccagcttcgacgcgctttgaaatcgaagcacccatatattgaacggaatcttggt
tcagttgtgagtattataaggcactctatccaaaatgctgctgcatttgaggagacttca
aaacagcttaaagaaagaaagttggaattggcgaatgtagagaacactttggctactgaa
gaatctgaagtcttgccttctgaagcaactgaaatattaaatgctggggaagccgataat
atacagaatagcactttaacttttgagaattcactggatcccatacaacctatggacgtt
tccgagaactttagcagcgccaaggctgaagttgctaacgccgaaccagaaaaatcgatg
ttctctctaaagacaaatgacactactgctagtgatcagagtgcatcacatgtagctgaa
gcaactgttcagttgctaaagaagccaagccgagctttcggggcattgcttggaaattca
ggaaagaggaagtttgatactgataaaagagaaaaagaagaaacaaagctggagcaaata
aaatcaacagtgagtctaccattccatgcatttaccggcaaagatgaaaaactgcagcag
aattttcaagaaccacctagcaaggcatcagaagattcacataaagaagagccttcaatt
cctgccacgggttcaaccatggaagacatcattgtcttagacgatgatgtttcagatatc
gaggaagcagccaatgaagacaactccgataaaaaacaatcggaaaacaaggaagaagct
gacgaggagggggacgagcccatgtcactgtctgatctttcctctagcttccagaagtgc
tttccttcactagatcaaacaaaaactcccaaagtggccgataaatctcaaccgtccgat
ggttttttgcaggtgaagcctttcgactatgaagctgctcgagaagagatgaaatttggg
gtcggccaatcaaaggaaaaaggggccgataataataagagagataagaaaaaagtttct
acagtaactaaatcggaaaaggatgaggggcccgcaacagatctcccacagggtagaaga
cgtcaggcttttccagcgtcaggcaatcgcagtgcaacttttcgttga
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