Erythranthe guttata (spotted monkey flower): 105951699
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Entry
105951699 CDS
T07346
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105951699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105951699
03012 Translation factors [BR:
egt03012
]
105951699
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105951699
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105951699
Translation factors [BR:
egt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105951699
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
ATPase
AAA_16
AAA_19
PhoH
T2SSE
AAA_23
ABC_tran
Dicer_dimer
Myosin_head
Motif
Other DBs
NCBI-GeneID:
105951699
NCBI-ProteinID:
XP_012830605
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MHSRLRVFLTRAARKHGVLSSYSVFSKPRIVISGSSTSTANAVQNTRCFQPQDFTYYSAV
VRRGFCSYAVEKFSDDEYECDYENNPASSSVANIDEWKWKLSMLLRNDKDQEIVSKDKRD
RRDFEQISGLAKRMGLHCEIYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEG
LLQEHLDRTVLNAEKGGDTLSETESTNQLQNVDSVEDADSFLDGSVMEKVLQRRSLRMRN
MQRTWQESPEGRRLLDFRRSLPSSREKERLLQAIARNQVVVISGETGCGKTTQLPQYILE
SEIESGRGAFCNIICTQPRRISAMSVAERVSAERGEPLGESIGYKVRLEGMKGKNTHLLF
CTSGILLRRLLSDRNLNGVTHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATL
NADLFSNYFSGAPMIHIPGFTYPVRAHFLEDILEMTGYKLTSFNQIDDYGQEKLWKTQKQ
LAPRKRKNQITTLVEEALSKSNLENYSSKVHESLTCWTPDSIGFNLLEAVLCHICRKERP
GAVLVFMTGWEDISCLRDQIKAHPLLGDPNRVLLLTCHGSMATAEQKLIFEKPPPNVRKI
ILATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQ
PGECYHLYPQCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIGDFLSAALQPPEPLAV
QNAVDFLKMIGALDEHENLTYLGKFLSVLPVDPKLGKMLIMGAIFRCFDPILTIVAGLSV
RDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSLQ
TLQAIHSLRKQFTYILRDGGLLDMDGATHNKLSHNQPLVRAVICSGLFPGIASVVHRETS
MSFKTMDDGQVMLYANSVNARYQTIQYPWLVFGEKVKVNTVFIRDSTGVSDSILILFGGK
LDYAAAMAGNIKMLGGIFGFFQGPDFGRVVYKEKKRFQQKFPSFIMIDIYEYGKLQLQHP
NMDIHKEGKYLMLGVQELVSGDQCEGRFVFGRESKKPRDSNTDKDRFTKDGTNPKSLLQT
LLMRAGHSPPKYKTKHLKTNEFRALAEFKGMQFVGKPKKNKTLAEKDAAIEALAWLTRTS
ENNHHLDEDDNSTPDVTDNMLKLLGRRRKSKRYPR
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcattcccggctaagagtttttcttacacgcgccgccagaaaacacggcgttctctcc
tcctattcagttttctcgaagccgaggattgtaattagcggcagctctactagtactgct
aacgctgtccaaaatactcgttgttttcagccgcaggatttcacttattactctgctgta
gttcgacgtgggttctgtagctacgccgtcgagaaattctccgacgacgagtatgaatgc
gattacgagaacaatccggcctcatcatctgttgcgaatatcgatgagtggaaatggaaa
cttagcatgttgttacgaaatgataaggatcaagaaatagtgtctaaagataaaagggac
cggagagactttgaacagatatccggcctagccaaacggatggggctccactgtgaaata
tatgggaaagttgtcgttgctagcaaagttcctctccccaactacagacctgacctggat
gataagcggcctcaaagggaggttgtaattccgctgagcttgcaaagaagggtggagggt
ttgctccaggaacatcttgatagaacagtcctgaatgctgaaaaaggaggagacacttta
agcgaaacagagagcaccaatcagcttcagaatgtagatagtgtcgaagatgcagattct
ttccttgatggttctgtcatggagaaagttctgcagaggcggagcttgcgtatgcgtaac
atgcagagaacttggcaggaatcacctgaagggaggaggttgctcgattttaggaggtct
ctcccttcatccagggagaaggaaaggctccttcaagcaattgcgaggaaccaggttgtg
gtgatttctggggagactggatgtggtaaaaccactcaacttccccaatatattttggag
tctgaaatagaatctggtcggggagcattttgtaacataatctgtacgcagcctcgaaga
atatccgccatgtctgttgcagaaagagtttctgcagagaggggtgagcctcttggtgaa
tcaattggatataaagtacgattggagggaatgaaaggcaagaacacacatttgcttttc
tgcacaagtggaattttgctccgtaggctgttgagtgatagaaacctgaatggtgtcact
catgtttttgttgatgaaattcacgagcggggcatgaatgaagacttcttgttgattgtc
ttgaaggatcttcttccacgtcggcgggatttgagattgatcttgatgagtgccactctg
aatgctgatttgttttctaattatttttctggagcaccaatgattcacattcctggcttc
acgtatcccgtaagagcccattttctagaagatattctggaaatgaccggatataaattg
acttcatttaatcaaatagatgattatggccaagagaagttgtggaaaacacagaagcaa
ctagcaccgcggaaaagaaagaatcaaatcactactcttgttgaggaagctctgagtaaa
tcaaatttggagaattatagctctaaggtacacgagtcgttgacttgttggacacctgat
tctattggattcaacctactcgaggctgtattatgccacatatgtcgcaaagaacgaccc
ggtgctgtgttagtatttatgactggatgggaggatattagttgcttgagggatcaaata
aaagctcaccctcttttaggggaccctaatagggttcttctgcttacatgccatggctcg
atggcaaccgctgaacagaaactcatatttgagaaaccacctcctaatgttcgcaaaata
atacttgccacaaatatggccgaggcaagtattacaatcaacgacgtagtttttgttgtt
gactgcggaaaagcaaaggaaaccacttacgatgctctaaacaacacaccatgtttgtta
ccttcatggatatcccaagcttctgctcggcaaaggaggggtagggcggggcgtgtgcag
ccaggggagtgctaccatttatatccgcaatgtgtttatgaagcttttgctgaatatcaa
cttcccgagcttttaagaactccgttaaactctctctgtttgcaaatcaaaagcttacaa
gtcggaagtattggagattttctctctgctgctcttcagccccctgaaccattggctgtg
caaaatgccgttgattttttgaagatgattggtgcattagatgaacatgagaatcttaca
tatcttggaaagtttttatccgtgcttccagtggatcctaagctggggaaaatgctaatc
atgggtgctatttttcgttgctttgaccctatcttgactattgtggctggtctcagtgtc
agggatccttttcttttgccccaagataaaaaggacttagctgggacagccaagtcgaga
ttctcggcaaaggactacagcgatcacatggctcttgtgcgtgcgtacgaaggatggaaa
gatgcagagagagaaggatctgcgtatgaatattgctggagaaattttctctctctacaa
actcttcaggctatccattctctccgtaagcagtttacctacattttgagagatggtgga
ttgctagacatggatggagctacccataataaattaagtcacaatcaaccgttggttcgt
gccgttatatgttccggtctatttcccggtatcgcttctgtagtgcatagggaaacttca
atgtctttcaaaacaatggacgatgggcaagtcatgctatatgcgaattcagtgaatgca
cgttaccaaacaatacaatacccttggttggtatttggcgagaaggtgaaagtcaatacc
gtgttcatacgcgactcgactggcgtatctgattccattttgatcctctttggcggtaaa
cttgactatgctgctgctatggctggaaatataaaaatgttgggagggatatttggtttt
tttcagggccccgattttggcagggtcgtttataaagaaaaaaaaagattccaacaaaaa
tttccgtcatttatcatgattgacatatatgaatatggaaaactgcagcttcaacatcca
aacatggacatccacaaggaaggcaaatacctaatgttaggcgtccaagaacttgtttcg
ggtgatcaatgcgaagggagattcgtttttggccgagaaagcaaaaaaccgagagattct
aataccgataaagacaggtttacaaaagatggaactaaccctaagagcttacttcagaca
ctcttaatgcgagcaggtcactcgcctcccaaatacaaaacgaagcatcttaaaacaaac
gaatttagggcattggccgaatttaaaggcatgcagtttgtgggaaaaccgaagaaaaat
aaaaccctagctgagaaagatgctgctatagaagcattggcctggttgactcgcacgtct
gagaataatcatcatctagatgaagatgacaattctacccctgatgtaaccgacaatatg
ctcaaacttcttggcaggcggagaaagtcgaaacggtacccacgctaa
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integrated database retrieval system
