Erythranthe guttata (spotted monkey flower): 105951939
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Entry
105951939 CDS
T07346
Name
(RefSeq) putative ATP-dependent RNA helicase DHX30
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105951939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105951939
03012 Translation factors [BR:
egt03012
]
105951939
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105951939
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105951939
Translation factors [BR:
egt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105951939
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
R3H
HA2_C
Ank_2
AAA_19
Ank_5
AAA_22
ATPase
nSTAND3
HA2_N
Ank_3
ABC_tran
Ank
AAA_7
FtsK_SpoIIIE
PhoH
Sigma54_activat
NACHT
Motif
Other DBs
NCBI-GeneID:
105951939
NCBI-ProteinID:
XP_012830876
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MAPGKGKGKYGGKKKQKNEGNNSEAKQKNGGKTRQERKSNSEATRIRVSQILEQFRNSKD
EVHTFESFLPRDERAIVHMLSSKMGMKSKSSGVGQKRRISVTKIKSAVEPVKGKENLVSF
KFSEDSKAVLQDLFSRYPPDEVEMAEKKVEESSGRSSAVLAIGDDMFCKPVMTESEIASK
VESLASKMEKGQLIKIAETRSRLPIASFKDNITSTIESNQVVLVCGETGCGKTTQVPQFI
LDHAWSKGQLCKIVCTQPRRISATSVAERIASERAEYIGDSVGYKIRLETKGGRNSSLVF
CTNGVLLRLLVEKGSTKKKTKSSKKKKPNALSEITHIVVDEIHERDRFSDFMLAILRDML
PSYPSVRLVLMSATIDADRFSNYFGGCPVIQVPGFTYPVKSFYLEDVLSILRLDIKKNES
AKQTKTNAIKTSSLIEECRVALDEAIDLALSNDEFDPLVELISQTEDRKAFNYQHSKTGI
TPLMVFARKGRVSDICMLLSLGVDCNLRCNEGKTAYTYAAQANQIEAADIINKHDEKEFT
FSEEDHKLIDEYLSKVDPELVDIVLIEQLLRKICDDSMDGAILVFLPGWDDINKTKDRLL
ASPFFNNSSKFAVFALHSMVPSVEQKKVFKRPAIGCRKIILSTNIAETSITIDDVVYVID
SGRMKEKNYDPYNNVSTLQSSWISKASMKQREGRAGRCQPGICYHLYTKLRADSLPDFQV
PEIKRMPIEELCLQAKLIDPSCKIETFLNKLLDPPIIETLQNAITVLQDIGALTPEEKLT
LLGEKFGSLPTHPVTSKMLFLAILLNCLGPALTLACASEYRDPFIIPMLPEQRKKADTAI
SELASFYGGHGDQLSVVAAFECWEMAKSKGEEARFCSQYFISSGTMVMLSGMRKQLEREL
FRNGFLPKDSSRFSSNAREPGILHAVLVGGLYPMVGRVISKGKKFVVETSDGNKVRLHPH
SVNSRLLFKNCTSQPFVMFDEITRGDAGLYIRKSNVVGSLPLLLLANEMVVAPTCENDGD
GNGNGGGDGNGKGDVDGDGNGKGGVDGDGNGKGDVDGDGKGNGDGDGNGDGDGDSDGDNS
NCEDDDGSDEDEEEITDLSESKQGEKIMSSPENDVKAVIDRWLPFGCKALDVAQIYCLRE
RLSAAILYKVTHSNEELPEHLEASVYAIASILANDGMSGVSLPTEPVDSLTTSVGDADIG
GDAKKTTATTKELPKSYLKSLMYRGRPHNNSPAPPPQQNYPAPPHQQNYPAPPRQQNYPA
PPRQQNYPPQYHQYRQPVSRFHTPPSESYPVTAHGIAQERGIFPKRRRGQHW
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggtaaaggaaaaggaaaatacggcggcaaaaagaagcagaagaatgaggga
aacaactcagaggcgaagcagaagaatggcggaaaaactcgacaagagagaaaaagtaat
tctgaagccactcgcattcgagtttctcagattctcgagcaatttcgaaattccaaggac
gaggtgcacacatttgaaagttttctgccaagggatgagcgagctattgtgcacatgcta
agcagtaaaatgggcatgaagtcgaaaagttctggggtgggacaaaagcgacgaatttct
gtaaccaagataaaaagtgcagtagaacctgtaaaagggaaggaaaacctcgtttctttt
aaattttcggaagactcgaaggctgtattacaggatttattttctcgatacccgcccgat
gaagtggaaatggcggagaagaaagtcgaagaaagtagtggacgatctagtgcggtatta
gcaataggagatgatatgttctgcaaacctgtaatgaccgagtctgaaattgcaagcaag
gtggaatcacttgcttcaaaaatggagaagggtcaattgatcaagatagcagagactagg
tcgaggcttccaattgcatctttcaaggataatattacttctacaatagaatctaatcag
gttgtgctcgtatgcggtgaaaccggctgtgggaaaacgacacaggtcccacaatttatt
ctggatcatgcatggagtaaaggacagctatgtaaaatagtttgtactcagcctaggcga
atctctgccacatcagtggctgaaagaattgcttcagaaagagctgaatatataggcgat
tctgttggatacaagattcggctggagaccaaaggtgggaggaattcgtctctcgtgttc
tgcacgaatggggttctgttgaggcttctagttgagaaaggaagtaccaaaaagaagaca
aaatcttccaaaaaaaagaagccaaatgccctctcggagataactcacatagttgtggat
gaaattcacgaaagggaccgcttctctgatttcatgctggcaatactcagagacatgctt
ccgtcttatccctctgtgcgtctggtattaatgagtgccacaatcgatgcagatagattt
tcaaattactttggtggctgccctgttattcaagtaccaggctttacctatcccgtaaaa
tcattctacctggaagatgtactatcaatattgagattagacataaaaaaaaatgaaagt
gcgaagcaaactaaaactaatgccatcaaaacctcttccttaatcgaggaatgtagagtt
gctctcgacgaagctatcgacttggctttatcaaatgacgaatttgaccctctcgtcgag
ttaatatctcaaacagaggaccgaaaggcctttaattaccagcattcgaaaaccggaata
acaccactaatggtatttgcccgaaaaggaagagtcagtgatatttgcatgcttctctct
ctcggtgtagactgtaatttacgatgcaacgaaggaaaaaccgcttacacatacgctgca
caagcgaatcaaatagaagctgccgatattatcaataagcatgatgagaaggaatttaca
ttctccgaggaggatcataaattaatcgatgaatacttatcgaaagtcgaccctgaacta
gtcgatattgtgcttatcgaacagctactgaggaaaatatgtgacgactccatggatgga
gctattcttgttttccttcctggctgggatgatataaataaaacgaaagatagattatta
gctagccctttctttaacaattcgtctaaattcgctgtctttgcccttcattctatggtt
ccatcagtggagcaaaagaaagtattcaaacgcccagctattggatgccgcaagattatt
ctttccactaacattgcagagacttctattactattgatgatgttgtgtacgttatagac
agtgggcggatgaaggaaaagaattacgacccttataacaacgtgtccactcttcagtct
tcttggatttcgaaagcaagtatgaagcaaagagagggtcgtgcgggaaggtgccaaccg
ggtatttgttatcatctttatacgaaactccgggcagattcactgcccgattttcaagtt
cccgagattaagagaatgccgattgaagaactatgcctgcaggcaaagcttatcgatcca
tcttgcaaaattgaaactttcttgaacaagctgctggacccacccataattgagacatta
caaaacgcaatcaccgttcttcaagacataggcgcactgacccccgaggagaaactcaca
ctactcggtgagaagttcggatctctgcctacccatccagtaacgagcaagatgctgttt
ctcgcgatactattgaactgcctgggccccgctttgactctagcctgtgcttccgaatat
agagacccattcatcatacccatgctacccgaacaaagaaagaaagccgatactgcaata
tctgagctggcttcgttttacggtgggcatggcgaccaattatctgtcgtggcggctttc
gagtgttgggaaatggctaagtcaaaaggcgaagaagctcgtttttgttcgcagtacttc
atttcttcgggcactatggttatgctatcgggtatgcgaaagcagctcgaaagggagctc
tttaggaatgggtttttgccaaaggattcgtctcgttttagtagtaatgcgcgtgagcct
gggatattgcatgctgtgcttgttgggggtttgtatccaatggtggggagggtgatttca
aagggtaagaagtttgttgtggagacttcggatgggaataaggttaggttgcaccctcat
tcggtcaattcgaggctgttgttcaagaattgtactagtcagccttttgttatgtttgat
gagatcactcgtggagatgctgggctttacattaggaaatctaatgttgtgggctcgctt
ccgcttttgttgttagccaatgagatggtagttgctccgacatgtgaaaatgatggtgat
gggaatgggaatggtggtggtgatgggaatggaaaaggtgacgtggatggtgatgggaat
gggaaaggtggcgtggatggtgatgggaatgggaaaggtgacgtggatggtgatgggaaa
gggaatggtgatggggatgggaatggggatggtgatggggatagtgatggtgataatagc
aactgtgaagatgatgatggtagtgatgaggatgaagaagagattaccgatttgtcggaa
tcgaagcaaggggagaaaataatgtcttcgccggaaaatgatgttaaggctgtcattgat
cggtggctaccttttgggtgcaaagcgctcgatgttgctcaaatttactgtctgagggag
aggctatcagcggcaattttgtataaagtgacacattcgaatgaagaacttccggaacat
ttggaggcgtctgtatacgcaatcgcaagtatattagcgaatgatggaatgagcggtgtc
tctttgccaactgagccagtggactctctcactacaagtgtcggtgatgctgatattgga
ggagatgccaagaaaaccaccgctacaactaaagagctgcccaaaagttatctcaagtct
ttaatgtatcgcggtaggccccacaacaacagcccggctccgccacctcagcaaaactac
ccggctccgccacatcagcaaaactacccggctccgccacgtcagcaaaactacccggct
ccaccacgtcaacaaaactacccgccacagtatcatcagtacagacaacctgtaagtcgc
ttccacacgcctccctcggaaagttaccctgtgactgcgcacggaatagcacaagaacgg
ggaatctttccaaaacgacgacgtggacaacactggtaa
DBGET
integrated database retrieval system
