Erythranthe guttata (spotted monkey flower): 105951957
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Entry
105951957 CDS
T07346
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105951957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105951957
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105951957
mRNA degradation factors
5'-3' decay
Decapping complex
105951957
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
105951957
NCBI-ProteinID:
XP_012830901
UniProt:
A0A022RSU9
LinkDB
All DBs
Position
Unknown
AA seq
816 aa
AA seq
DB search
MERSDGNDFNEFLDPSSSSVSDSVLFDASQYTFFGKGMVDEVELGGLEDEDEGVPVNAGR
FSGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKLNKVVTGPRHPGVIGDRGSGSFSR
ESSSATEWAREADCPDWHEHHMSDSECYEENKRWSSQPHLSQMYLQESKPLYRTSSYPEQ
QPQLQHFNSEPILVPKSSFTSFPPPGSQQASPNNSHHLNLSTLSGGPQSPFSAPNNPSLT
NSTLNLSGLPRGYHYNTNMSRLTSPNISHHNRLQNQWSSHAGVLHGDHTLLLNNVLQHQY
QNGLLPSQQLLSQQQQRGHISFNPSLAHFSAMQSQIFNTFPSPSHFNKYGLTDKREPKPK
SAQKGRHSVRFSNQSSDASSQRSDSNLPQFRSKYMTAEEIESILKMQHASNHGNDPYVDD
YYHQASLAKKSAETRSRYRFCPSHQKEQSSRSRNSTESQPHLHVDSLGRVCFSSIRRPHT
LLEVNPPPSACGDGNSDPKSSERPLEKEPMLAARITVEDGLCLLLDVDDIDRLLQFTQPQ
DGGSQLRRKRHLLLEGLAASLQLVDPLGKSGNSVGLSPKDDIVFLRIVSLSKGRKLISKF
LQLLLPGSELTRIVCMAIFRHLRFLFGGLPSDPEAATTINSLAKTVSLCVSGMDLNSLSA
CLAAVVCSSEQPPLRPVGSPAGDGASVILKSVLERATVLLRDPPFGSNFSIPNPALWQAS
FDAFFGLLTKYCVSKYDSIVQSIIAQNAPNAESIDSEAARAVSREMPVELLRASLPHTDE
SQKKLLLNFAQRSMPVTGFNAHGGSSGQINPESVRG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggagagatctgatggaaatgatttcaatgaatttctcgacccatccagcagctctgtt
tcagatagcgtgctgtttgatgcgtctcagtatacctttttcgggaaaggtatggtggat
gaagtagaactgggcggtttggaagatgaagacgagggtgtacccgtaaatgcaggcaga
tttagtggggaagatgagttaaatgagtatcatttgtttgacaaagatgaggggtcagga
ttaggatcgttatctgatatagatgatctagctactacatttgcaaagttgaacaaagtc
gttactggacccagacatcctggagttattggtgatcgaggatctggatctttctctaga
gaaagttcatcggctacagaatgggcacgagaggcagattgtcctgattggcatgagcac
cacatgtctgattcggaatgctatgaggaaaataagagatggtcatcacagccccatctc
tctcaaatgtatcttcaagaatcaaaaccgttatacagaacatcatcgtaccctgagcag
caaccgcagctacaacacttcaatagtgagcctattttagtgccaaagtcatctttcact
tcctttcctccaccaggttcccaacaagcttcaccgaataattctcatcatcttaatttg
tcaaccctttctggtggaccccagtcgcctttctctgcaccaaataacccttcgttaact
aactctactctcaatttgtctggcttgcctcgtgggtaccattacaatacaaacatgtca
cgtctaacctcgcctaatatctctcaccacaatcgacttcaaaatcaatggagcagccat
gctggtgttctccatggggatcatactcttctcttgaacaatgtattgcagcaccagtat
caaaatgggttattgccatcgcagcagctgctgtcgcaacaacaacagagagggcacatt
tcatttaacccgtcattagcccatttttcagcaatgcaatctcagatatttaataccttt
ccttcaccttcacatttcaataaatatggattaaccgataagagagaaccgaaacctaaa
tcagcgcagaaaggtagacactctgtgcggttttccaaccaaagttccgatgctagcagc
cagaggagcgacagtaatctgccgcaattcagatcaaagtacatgactgctgaagaaatc
gagagtattctgaaaatgcagcatgcttcaaaccacggcaatgacccttacgtggacgat
tattaccaccaagccagtcttgctaagaagtctgctgaaacaaggtcaaggtatcggttt
tgcccatcccaccagaaggaacaatcttcccgatcgcgtaacagtactgaatcgcagccc
catctccatgtggattctcttggaagggtttgtttttcctcgatacgtaggccccacaca
cttcttgaagttaatcctcctccatccgcttgtggagatggaaactctgatccgaagtca
tctgagaggcctttggaaaaggaaccaatgcttgcagcaaggataacagtggaagatggg
ctttgtcttcttctcgatgtggatgacattgatcgcctcttacagttcactcaaccccaa
gacggtggaagccagctcagacgcaaacgtcatcttctcttagaaggcttagccgcttct
ctacagctggtggaccccctcggcaaaagtggaaactctgtcgggctgtcaccgaaggac
gatatagtctttttacgtatagtttccctttccaaaggccggaaactgatctcgaagttt
cttcagcttcttctacctggcagcgagctaactcggatagtttgcatggctatatttcgc
catttaaggtttctgtttgggggcctaccttccgacccagaagcagcaaccaccattaac
agccttgctaaaacggtctctctatgtgttagtggaatggatctcaattcgctcagtgct
tgtcttgccgctgtggtgtgttcctccgaacaaccgccgcttcgtccggtgggtagcccc
gccggagatggtgcctcggtcatcttaaaatccgttctggaaagagcaactgtcctattg
agagatcctccgtttggcagcaacttcagcattcctaatcctgctctttggcaggcttcg
tttgatgcatttttcggtcttttgacaaagtactgcgtgagcaaatatgatagtatagtg
cagtctataattgctcagaatgcaccgaatgcagagtcgattgattcggaggcggctaga
gctgtgagtagggaaatgccagttgagcttctacgtgctagtctgccacacactgacgag
agccagaagaaattgttgctgaattttgctcaaagatcgatgcctgttactggatttaat
gctcatggtggaagtagtggacaaataaatcccgagtctgtacgaggctga
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