Erythranthe guttata (spotted monkey flower): 105952101
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Entry
105952101 CDS
T07346
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03015
mRNA surveillance pathway
egt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105952101
09123 Folding, sorting and degradation
03018 RNA degradation
105952101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egt03019
]
105952101
03041 Spliceosome [BR:
egt03041
]
105952101
Messenger RNA biogenesis [BR:
egt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105952101
mRNA cycle factors
Stress granule specific factors
105952101
Spliceosome [BR:
egt03041
]
Complex C
Other components
Complex C specific factors
105952101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_occluded
RRM_Nup35
RRM_7
RRM_3
RRM_MARF1
SET_assoc
PABC_AtC3H46
HPS3_C
Motif
Other DBs
NCBI-GeneID:
105952101
NCBI-ProteinID:
XP_012831067
UniProt:
A0A022RQB7
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAAQMQQMQPQVQVANAASSGGAPFVTSLYVGDLEPNVTDSQLYDLFSQMGEVVSVRVCR
DLTSRGSLGYGYVNYSNPQNAERAIIELNFTPLNGKPVRIMYSHRDPSVRKSGSGNIFIK
NLDKDIDHKALHETFSSFGNILSCKVATNTSGQSMGYGFVQYINEESAQKAIEQLNGMLL
NGKQVYVGPFLRKQEREMSTDKTKFTNVFVKNLSESTTEEELRNVFGEFGTITSTVIMRN
EDGTPKGFGFVNFEDADGAARAVESLNGKKIDNKEWYVGRAQKKSEREQQLKHRFEQSVK
EAVDKSQGSNLYVKNLDDTIGDDQLNELFAAFGTITSCKVMRDPKGISRGSGFVAFSSPE
EASRALTEMNGKMITGKPLYVALAQRKEDRRARLQAQFSQMRPIAMAPTVAPRMPMYTPG
GPGIGQQIFYGQPPPAMLPPQPGFGYQQQLIPGMRPAGQFMPNMFMPMVQQGQQGPRPGG
RRPNSVQMQQGPQPLPVMQQQMGPRGRGGYRYPPGRGMPDVSLQGGMLSVPYEMGGLPLR
DARISQPIPIGALASALANASPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQTEV
LHLLESPEALKAKVAEAMEVLRNVSQNSAATADQLASLSLNE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagatgcagcagatgcagcctcaggtgcaggtggcgaacgccgcttcctct
ggcggcgctccgttcgtgacttctctgtacgtcggcgatctcgagccgaacgtcaccgat
tcccagctctacgatctgttcagccagatgggggaggtggtgtccgttagggtttgcagg
gatttgactagccgcggctcgctcggatatggctacgtcaattacagcaatcctcaaaat
gctgagagagcaataattgaactgaacttcactcctctaaatggaaagcctgtcaggata
atgtattctcatcgagatcccagcgtacgcaaaagtggttctggaaatatatttatcaag
aatttggacaaggatatcgaccacaaagctctgcatgaaacattttcctccttcgggaac
attctctcatgcaaagtagccacaaatacttccggtcagtccatgggctatggctttgtg
caatacattaatgaggaatctgcgcagaaggccatcgagcaactcaatggcatgctgttg
aatgggaagcaagtctatgtgggacccttcctacgcaagcaagaaagagagatgtcaaca
gacaagacaaaattcacgaacgtgtttgttaagaacttgtccgaatcaacaactgaagaa
gaacttcggaatgtgtttggtgaattcggtacaatcacgagtacagtgattatgagaaac
gaagatggaacgccgaaaggctttggatttgtcaactttgaggatgcagatggtgctgct
agagctgttgagtcccttaatggcaaaaagattgacaacaaggaatggtacgtcggtaga
gcccagaagaaatctgagagagagcagcaactgaaacaccgttttgagcagagtgttaag
gaagcagttgacaaatcacagggctcgaatctgtatgtcaaaaatttggacgacaccatt
ggagatgatcagcttaacgagctcttcgctgcatttggtacgataacttcttgcaaggtg
atgcgagatccaaagggaattagcaggggttcagggtttgtagcattctcatcacccgaa
gaggcttctagagctcttactgaaatgaatggcaagatgattactggcaaacctctctat
gtcgcacttgctcaaaggaaagaagatagaagagcacggttacaggctcagttttctcaa
atgaggccaatagcaatggcacctactgttgctcctcgtatgccgatgtatacacccggt
ggtcctggtatagggcaacaaatattctacggacagccaccaccagccatgcttcctccc
caacctggatttgggtatcagcagcagcttatacctggtatgaggccagctgggcaattc
atgccaaacatgtttatgccgatggtccaacaagggcagcaaggtccacgtcctggtggt
aggagacctaattctgttcaaatgcaacagggcccacagccacttcctgttatgcagcag
cagatgggtccgagaggacgcggtggttataggtaccctcctgggcgtggtatgccagat
gtctccttgcaaggaggtatgctttccgttccatatgaaatgggcggcttgcctttgcgt
gatgctcgaatctctcagccaatccctattggagctttggcctctgctcttgcaaatgct
tctcccactgaacaaagaacgatgttgggtgaaaatttgtacccactggtcgaacaattg
gagcccgagactgcagcaaaggtgacaggcatgcttcttgaaatggaccaaacggaggtg
ttgcacttgttggagtcgccggaagctcttaaagctaaggttgccgaggcaatggaggtt
ttgaggaacgtgtctcagaatagcgccgccactgccgaccagttggcttctttgtccttg
aatgagtga
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