Erythranthe guttata (spotted monkey flower): 105952251
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Entry
105952251 CDS
T07346
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
egt
Erythranthe guttata (spotted monkey flower)
Pathway
egt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
egt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105952251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
egt03041
]
105952251
Enzymes [BR:
egt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105952251
Spliceosome [BR:
egt03041
]
Complex C
Other components
Step II factors
105952251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_22
AAA_19
T2SSE
nSTAND_NTPase5
AAA_30
nSTAND3
SLFN-g3_helicase
AAA_24
Sigma54_activ_2
PhoH
AAA_16
SRP54
ABC_tran
Flavi_DEAD
NB-ARC
Cas3-like_C_2
TsaE
Motif
Other DBs
NCBI-GeneID:
105952251
NCBI-ProteinID:
XP_012831239
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MKKQIAAEDDSPPPQERSFQKIKKPERPAPPLQSAAAKEWRIRVNPKPVKTEHEISDLAE
KLKGVDLSRTTAAPELKKFRQKSKVNPPRRRPRHVEIRRSFPIYKLKNELVQAVHDNQVL
VVIGETGSGKTTQLTQYLADTGKYTTDGKKIGCTQPRRVAAISVAKRVAEEFGSPLGQQV
GYTIRFEDRTSPNTIIKYMTDGMLLREIFTDKELSDYSVIILDEAHERTIHTDVLFVLLK
ELLVRRPDLRLVVTSATLDAEKFSEYFSNCRIFRIPGRIFPVETIYVDPPDDRDYVDLSL
DMVLQIHATEPEGGDILVFLTGQEDIDYACQSLHERMEEILRELHEENIYIRELIILPVY
SALPNEIQSRIFEPAPPGKRKVVFATNIAEASLTIDGIFYVIDCGLAKQNVYNYKRGIDS
LATARISQASAQQRKGRAGRTGPGKCFRLYTESTFLNEMGAATPEIQRINLCTTALNLKS
MGINDLVAPSFDFMDPPPPEALTSAVEQLRKLGALDKNGIVTNLGKKMAEFPLDPPMSKM
LIASVDLGCSDEILTITAMIQTGNIFYRPRDRQDEADKKKEKFIHPSGDHLTLLTVYELW
KKAGKFSGQWCYDNFVQSQSLRTAHDARKQLASIMERLGLGVVSCGKDFTRVRKAVAVGF
CLHAAKKDTLGRGYVRLVDNRSVYLHPSSSLFSRQAAMPEWVVYNELVMTTKVYMREVSA
VDPKWISVLTTKSKKSKLIKNLLDK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagatcgccgccgaagatgattccccgccaccgcaggagagaagtttccag
aagataaagaaaccggagaggcctgcgccgccgcttcaatccgccgcagcaaaagagtgg
aggataagggttaatccaaagcccgtaaaaacagagcatgaaattagcgatctcgctgaa
aaactcaaaggcgttgatttatcaagaacaaccgccgcgccggagttgaagaaattcaga
caaaaatcaaaggtaaatccaccaagaagaagaccacgccacgtggaaatcagacgaagc
ttccctatctacaagctgaagaacgaactcgttcaagccgtccacgataaccaggtcctg
gtcgtcatcggagaaaccggttccggcaaaaccacccagttaactcagtacctcgccgac
accggtaaatacaccaccgacggcaaaaaaataggttgcactcagcctcgcagggtggcg
gcaatctccgtcgctaaaagagtcgccgaagaattcggctctccgttaggacaacaagtc
ggctacacgatccggtttgaagatcgaacttctccgaacaccattatcaagtacatgact
gatggaatgcttctgagagaaattttcaccgataaagaattgtccgattactcggtaata
attctcgacgaagcacacgagagaactattcacaccgacgtactcttcgtcctacttaag
gagcttctcgtacggaggcccgatctccgcctggttgtaacttccgctactttggatgcg
gagaaattttccgaatatttctccaactgcagaatattccggattcccgggagaatattc
cccgtcgaaacaatctacgtagatccgccggatgaccgcgactacgtcgatttgtcgttg
gatatggtattgcagattcatgcgaccgaaccggaaggtggcgacatactcgtgttcttg
accggtcaagaagatatcgattacgcgtgccaatcactccacgagaggatggaggaaatt
ttacgcgaattacatgaagaaaatatatatattcgagagctgataattttaccggtttac
agcgctctacctaatgaaatccaatcgaggatattcgaaccggcgcctccgggaaagagg
aaagtcgtattcgccacaaatatcgcggaagcttctctgacgatcgacggtatattctac
gtcatagattgcgggctcgcaaagcaaaacgtgtacaattacaaacgaggcatcgattct
ctggcgacagctcgtatatcgcaggcgtcagcacagcagagaaaaggtcgagctggtcgc
acagggccaggaaagtgcttccgtctctacacagagagcactttcctgaacgaaatgggg
gccgcgacccccgagatacaaaggattaatctttgtacgaccgctcttaacttgaaatcg
atgggcataaacgacctagttgcgccatctttcgatttcatggacccacctccgccagag
gcactaacttccgccgtcgaacagttgcgcaaattaggagcgctcgataaaaacgggatc
gtcacaaatttgggtaaaaaaatggccgaatttccgctcgacccaccgatgtcgaagatg
cttatcgccagcgtagatctcggttgcagcgacgagattctgacgatcaccgcgatgatc
cagacgggaaatatcttctaccgaccgagggacagacaggacgaagccgacaagaaaaag
gaaaagttcatccaccctagtggggaccacctgacacttctcacggtttacgagttatgg
aaaaaggcggggaaattttcggggcaatggtgctacgacaactttgtgcagtcgcagtct
ttgaggacggcgcacgacgcgagaaaacagctcgcttcgattatggagaggcttggattg
ggtgttgtgagctgcggcaaggattttacgagggttcgaaaagctgtggcggttgggttc
tgtttgcatgcggcgaagaaggatacgctcggaagagggtacgtgagattggtcgataat
cggagtgtttatttgcatccgagcagtagtttgttttcgagacaggcggctatgcctgaa
tgggttgtgtataatgaattggtgatgacgacaaaggtttatatgcgcgaagttagcgcc
gtcgatccgaagtggatttcagttcttacaacaaaatcaaagaagagcaagttgatcaag
aacttattagacaagtaa
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